PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021642390.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | GATA | ||||||||
Protein Properties | Length: 354aa MW: 38476.7 Da PI: 4.5629 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 50.1 | 3.8e-16 | 207 | 243 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ XP_021642390.1 207 CQHCGVSEnkTPAMRRGPAGPRTLCNACGLMWANKGT 243 *******999************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 354 aa Download sequence |
MAAANPQPLQ ARPYEEHLRA PIQIEDEDGG EYEDGDAMDD VDEAHMNSGV NVAEHRGGVG 60 GGAGVVMASR TSELTLSFEG EVYVFPAVTP EKVQAVLLLL GGRDIPTAVP AIEVPFDQNN 120 RGVGDTPKHS NLSRRIASLV RFREKRKERC FDKKIRYTVR KEVAQRMHRK NGQFASLKES 180 SGGSSWDSAP SCLQDGTPCP ETFVWRCQHC GVSENKTPAM RRGPAGPRTL CNACGLMWAN 240 KGTLRDLRKG GRNVPPEQIE PETPIDVKPP IMEGEFSGNQ DEHGTPEDPS KAVTEGSNNP 300 SVNPEVVLQE ATEDLTSTLP MGVVHSSADD DEQEPLAELG NPSDTELDIP ANFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 5e-66 | GATA family protein |