PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642285.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

YABBY

Protein Properties

Length: 170aa MW: 18901.7 Da PI: 9.1731

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642285.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	148.3	7.3e-46	10	154	2	163
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 d++ se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l ++ + q + ++l +l+++++ ++ + ++s+s+ + XP_021642285.1 10 DLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPLQGQCLDHQL-------ILQKKQD---FFSDLRKGQSSSSSCT 94 77899***********************************98664444444333332222.......3333222...2222222233333333 PP YABBY 97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 s + +p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafs+aaknWa + XP_021642285.1 95 S-------GEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARY 154 3.......3445789999*********************************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MNLEEKATMD LVPPSEHLCY VRCNFCNTVL AVGIPCKRLL DTVTVKCGHC SNLSFLSTRP 60 PLQGQCLDHQ LILQKKQDFF SDLRKGQSSS SSCTSGEPLS PKAPFVVKPP EKKHRLPSAY 120 NRFMKEEIQR IKAANPEIPH REAFSTAAKN WARYIPNSAP GSVSGRSNSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	1e-68	YABBY family protein