PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021642281.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family SBP
Protein Properties Length: 505aa    MW: 55820 Da    PI: 7.8755
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021642281.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP132.71.2e-41166241277
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     Cqv gC++dls++k+yh+rhkvCevhsk+p+v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q
  XP_021642281.1 166 CQVYGCHKDLSSLKDYHKRHKVCEVHSKTPKVIVNGVEQRFCQQCSRFHLLVEFDDGKRSCRKRLAGHNERRRKPQ 241
                     **************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    
MESWRYIAEE KGLPFSDEID LSIDSFGRSR KVYTGWDGES VESLEFIDLG FSDMPRKPFH  60
ASNTGVEILG GSEAGIHSSK IELTSPGYMI ASNLQLESVS NHSNSLMESN SQDSSLIDLK  120
LGRLADGKDA QNNKFLKDRS VVSSASPTFQ AKKARTMSSC SQTPYCQVYG CHKDLSSLKD  180
YHKRHKVCEV HSKTPKVIVN GVEQRFCQQC SRFHLLVEFD DGKRSCRKRL AGHNERRRKP  240
QFCALPGRSL KLLQPYQGTK FLGTSLPKKA SFLFPNILPG GILCPERYEQ TNCYKPVKLE  300
EKLIYGTNGQ LLSKPFLHIH ANGIQNTSGI SPSAAEDLTI FNTASTIHEL AGVCHSSRAL  360
SLLSAESQDL GHSAGIIMAR PFISQANRSH HSVGISDKPF GVESSEKNMP NVFHSYGMNS  420
IKANHMGSFM VSCAGYAADL QVEPDGFLQE SDLLKAKYCV SAENGSTVDL LQLSSHLQRV  480
EQQRNSVQVK PEIEDFSTFL STYGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69170.11e-55SBP family protein