PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021642011.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 524aa MW: 57363.8 Da PI: 5.5257

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021642011.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.2	1e-11	310	355	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L+el+P++ K +Ka++L + +eY+k Lq XP_021642011.1 310 HSIAERLRREKIAERMKNLQELVPNS-----SKIDKASMLDEIIEYVKFLQ 355 99*********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MMDEYIDLYF PSASWADGDF KEKSSWGYSE TGQLNLLLPA SIRLYENDKG NPPLSMISSK 60 PSVECIHTPD KSPLTLGSES NYAVDKCLIS GNAQLQKVSQ NCRGKVSPTM NGSLKVGSVG 120 VQYDKSLPTL ASLNLSYPKQ LPVVDELTSS LSLTEVSITE AGNVGHDGLD SEQFEYHRSI 180 KDMHNLSMAK VWPSASHEDV SSISALMGQD MVQQFGIQEG NLDDKSDFMR KRHVSMDQIL 240 QLDKLSTTVT TKDKEDLQSY PFSSFTAGPN ITMATNEALF LSQTTSAAPA CDRTVKPRVR 300 ARRGQATDPH SIAERLRREK IAERMKNLQE LVPNSSKIDK ASMLDEIIEY VKFLQLQVKV 360 LSMSRVGAAG AIIPLITDVQ VEGSNSLSLA PSAGLGIDIS PSPDQVAFEQ EVLKLMESNL 420 TTAIQYLQSK GLCLMPIDLA TAISRGKAPL SCNGSEEEQK ISFANDLVHS NSISRSRNCS 480 FSGTETHQVS NDDNIMTEQL SKGNISNGCN GMVKREKAKN NFLR

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MMDEYIDLYF PSASWADGDF KEKSSWGYSE TGQLNLLLPA SIRLYENDKG NPPLSMISSK  60
PSVECIHTPD KSPLTLGSES NYAVDKCLIS GNAQLQKVSQ NCRGKVSPTM NGSLKVGSVG  120
VQYDKSLPTL ASLNLSYPKQ LPVVDELTSS LSLTEVSITE AGNVGHDGLD SEQFEYHRSI  180
KDMHNLSMAK VWPSASHEDV SSISALMGQD MVQQFGIQEG NLDDKSDFMR KRHVSMDQIL  240
QLDKLSTTVT TKDKEDLQSY PFSSFTAGPN ITMATNEALF LSQTTSAAPA CDRTVKPRVR  300
ARRGQATDPH SIAERLRREK IAERMKNLQE LVPNSSKIDK ASMLDEIIEY VKFLQLQVKV  360
LSMSRVGAAG AIIPLITDVQ VEGSNSLSLA PSAGLGIDIS PSPDQVAFEQ EVLKLMESNL  420
TTAIQYLQSK GLCLMPIDLA TAISRGKAPL SCNGSEEEQK ISFANDLVHS NSISRSRNCS  480
FSGTETHQVS NDDNIMTEQL SKGNISNGCN GMVKREKAKN NFLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	6e-61	bHLH family protein