PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021641671.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 538aa MW: 59073.9 Da PI: 6.2725

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021641671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	57.6	3.4e-18	160	246	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L++a++e+ ++l+rg+l++ +Weev++ + r ++ +++ +qCk+k +nl+kryk ++++++++ s+s++p+f+++e XP_021641671.1 160 EWSDTAIECLLDAYTEKFTQLNRGNLRGRDWEEVAAIVseRCQKQTKTVEQCKNKVDNLKKRYKLERHRMSNG-GISVSHWPWFKKME 246 5***********************************666677789********************99.67778******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MASCNDDFSL LGDDNHHQTN PNNHRHHHIL HQTYAPHRFP VKSAPIHAPP QPILPSPVAG 60 SGTGAKNLGS GVEEAEEQVV EEEEEEEEED NDTDSAFPEV NPFSDNSNPF NNETNVRPDK 120 RREGEDHSDG ANSNPYIYKK PRPSGSAGNS SGEYRKDREE WSDTAIECLL DAYTEKFTQL 180 NRGNLRGRDW EEVAAIVSER CQKQTKTVEQ CKNKVDNLKK RYKLERHRMS NGGISVSHWP 240 WFKKMEEIVG NSLPTKVTAD EDKSGGSSGT SARQSKRCAT TMASHVGQTN NIKSKSMCNI 300 RWRRVVLKIS GVALAGTGPN NIDPKVMVLI AREVAIACRL GVEVAIVVGG RNFFCGDTWV 360 SATGSDRRTA YQIGMMASVM NSILLQSALE KVGVQTRVQT AFAMQEVAEP YNRQRAIRHL 420 EKGRVVIFGG IGAGTGNPLF STDTAAALQA SEIHAEAVLK GTNVDGVYDC HSRDNNVTFE 480 HVCFRDLVSR GVTSMDMMAL TCCEENVVVF NLLEPGNISK ALCGEQVGTL IDQTGSIS

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MASCNDDFSL LGDDNHHQTN PNNHRHHHIL HQTYAPHRFP VKSAPIHAPP QPILPSPVAG  60
SGTGAKNLGS GVEEAEEQVV EEEEEEEEED NDTDSAFPEV NPFSDNSNPF NNETNVRPDK  120
RREGEDHSDG ANSNPYIYKK PRPSGSAGNS SGEYRKDREE WSDTAIECLL DAYTEKFTQL  180
NRGNLRGRDW EEVAAIVSER CQKQTKTVEQ CKNKVDNLKK RYKLERHRMS NGGISVSHWP  240
WFKKMEEIVG NSLPTKVTAD EDKSGGSSGT SARQSKRCAT TMASHVGQTN NIKSKSMCNI  300
RWRRVVLKIS GVALAGTGPN NIDPKVMVLI AREVAIACRL GVEVAIVVGG RNFFCGDTWV  360
SATGSDRRTA YQIGMMASVM NSILLQSALE KVGVQTRVQT AFAMQEVAEP YNRQRAIRHL  420
EKGRVVIFGG IGAGTGNPLF STDTAAALQA SEIHAEAVLK GTNVDGVYDC HSRDNNVTFE  480
HVCFRDLVSR GVTSMDMMAL TCCEENVVVF NLLEPGNISK ALCGEQVGTL IDQTGSIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein