PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021641450.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 409aa MW: 46629.5 Da PI: 5.2469

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021641450.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.1	2.8e-12	204	255	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ XP_021641450.1 204 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 255 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MDKEDNYSAT FTGLDYSLDH HRHHPQQDHE LIKSRIGEAS GDNSNGVIDY MLNNPHQQQL 60 SSGFCTSTSL DKLSFADVMQ FADFGPKLAL NQTKISEEET GIDPIYFLKF PVLNDKREEQ 120 SLMVPHLGGE NEERFKGLSS VENRAGMMGE DIREEEEARV SDNTSVQLQF LGDQDLQNKN 180 PIPEVKNKRK RPRTIKTTEE VESQRMTHIA VERNRRKQMN EHLRVLRSLM PGSYVQRGDQ 240 ASIIGGAIEF VRELEQLLQC LESQKRRRLY GEAPRQMGDS SLAIQQPQPP FFPTLPLPND 300 QMKLMDFETG LREETAENKS CLADVEVKLL GFDAMIKILS RRRPGQLIKT IAALEDLQLN 360 ILHTNITTIE QTVLYSFNVK IESESRFTAE DIASSVQQIF SFIHSNSSM

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MDKEDNYSAT FTGLDYSLDH HRHHPQQDHE LIKSRIGEAS GDNSNGVIDY MLNNPHQQQL  60
SSGFCTSTSL DKLSFADVMQ FADFGPKLAL NQTKISEEET GIDPIYFLKF PVLNDKREEQ  120
SLMVPHLGGE NEERFKGLSS VENRAGMMGE DIREEEEARV SDNTSVQLQF LGDQDLQNKN  180
PIPEVKNKRK RPRTIKTTEE VESQRMTHIA VERNRRKQMN EHLRVLRSLM PGSYVQRGDQ  240
ASIIGGAIEF VRELEQLLQC LESQKRRRLY GEAPRQMGDS SLAIQQPQPP FFPTLPLPND  300
QMKLMDFETG LREETAENKS CLADVEVKLL GFDAMIKILS RRRPGQLIKT IAALEDLQLN  360
ILHTNITTIE QTVLYSFNVK IESESRFTAE DIASSVQQIF SFIHSNSSM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	216	RMTHIAVERNRR
2	265	269	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-143	bHLH family protein