PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021641448.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 422aa MW: 48183.6 Da PI: 5.6077

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021641448.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38	3e-12	217	268	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ XP_021641448.1 217 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 268 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MFLLIDHFIT MLHCSELHLL QATFTGLDYS LDHHRHHPQQ DHELIKSRIG EASGDNSNGV 60 IDYMLNNPHQ QQLSSGFCTS TSLDKLSFAD VMQFADFGPK LALNQTKISE EETGIDPIYF 120 LKFPVLNDKR EEQSLMVPHL GGENEERFKG LSSVENRAGM MGEDIREEEE ARVSDNTSVQ 180 LQFLGDQDLQ NKNPIPEVKN KRKRPRTIKT TEEVESQRMT HIAVERNRRK QMNEHLRVLR 240 SLMPGSYVQR GDQASIIGGA IEFVRELEQL LQCLESQKRR RLYGEAPRQM GDSSLAIQQP 300 QPPFFPTLPL PNDQMKLMDF ETGLREETAE NKSCLADVEV KLLGFDAMIK ILSRRRPGQL 360 IKTIAALEDL QLNILHTNIT TIEQTVLYSF NVKIESESRF TAEDIASSVQ QIFSFIHSNS 420 SM

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MFLLIDHFIT MLHCSELHLL QATFTGLDYS LDHHRHHPQQ DHELIKSRIG EASGDNSNGV  60
IDYMLNNPHQ QQLSSGFCTS TSLDKLSFAD VMQFADFGPK LALNQTKISE EETGIDPIYF  120
LKFPVLNDKR EEQSLMVPHL GGENEERFKG LSSVENRAGM MGEDIREEEE ARVSDNTSVQ  180
LQFLGDQDLQ NKNPIPEVKN KRKRPRTIKT TEEVESQRMT HIAVERNRRK QMNEHLRVLR  240
SLMPGSYVQR GDQASIIGGA IEFVRELEQL LQCLESQKRR RLYGEAPRQM GDSSLAIQQP  300
QPPFFPTLPL PNDQMKLMDF ETGLREETAE NKSCLADVEV KLLGFDAMIK ILSRRRPGQL  360
IKTIAALEDL QLNILHTNIT TIEQTVLYSF NVKIESESRF TAEDIASSVQ QIFSFIHSNS  420
SM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	229	RMTHIAVERNRR
2	278	282	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-142	bHLH family protein