PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021641407.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family B3
Protein Properties Length: 605aa    MW: 67379.9 Da    PI: 8.6932
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021641407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3629.8e-2017107199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ff ++  s++l+s+rl++p +f+++++g    s  ++l+ +sg++W v+l  +++++ ++l  GW  Fvk++ ++ gD++vF++dg+ +f   v+
  XP_021641407.1  17 FFEIF--SSNLTSDRLRIPAEFTKHMEGR--ISGSVSLTGPSGNVWPVNL--TQQDNDIFLDHGWPTFVKDHLIECGDVLVFRYDGELCF--SVQ 103
                     56666..9***************777777..5557***************..*********************************99999..999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f+ 
  XP_021641407.1 104 IFDV 107
                     9985 PP
2B342.31.3e-132773551394
                     TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     s  l +p kf ++h   ++++++++l++ +g  W+v+    ++   ++++ +GW  Fv+ n++k gD+++F+l+++ e   +v
  XP_021641407.1 277 SYTLNIPYKFSTAHL--PNCKTEIVLRTVKGACWTVNSVPtTRVHTSHTFCGGWMAFVRGNDIKMGDVCIFELVRKCEL--RV 355
                     55799******9996..45899***************954566666799999********************9985444..44 PP
3B3521.3e-165075901096
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     ++ s  l +p +f ++h   ++++++++l++++g+ W+v+   + k+++ +++ +GW  Fv++n++k gD+++F+l+++   e++v++
  XP_021641407.1 507 TSGSYTLKIPHQFSAAHL--PNCKTEVVLRNSQGECWTVNSVPDSKGRSvHTFCGGWMAFVRDNDIKMGDVCIFELVSK--CEMLVHI 590
                     45566799******9996..45889****************7755555569************************9873..3356666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    
MAKENQAEMV NARRPCFFEI FSSNLTSDRL RIPAEFTKHM EGRISGSVSL TGPSGNVWPV  60
NLTQQDNDIF LDHGWPTFVK DHLIECGDVL VFRYDGELCF SVQIFDVSGC EKEAAFHSKC  120
SQDPNQFGRS IGQKREREGK AASSDKSCEY LLKKVRGDSS ELYSEHINKN LGAGVIISNK  180
EGCQLEEVIT AKKCREENSY HEQCFSPCPI SVIPSQSKTC YQNSEADIQK RIGKDENLPD  240
RVTGSILSQR EKRVAQSFIS CFPYFVRIMK RFNISGSYTL NIPYKFSTAH LPNCKTEIVL  300
RTVKGACWTV NSVPTTRVHT SHTFCGGWMA FVRGNDIKMG DVCIFELVRK CELRVFILRV  360
GKEVLENQSG EVASNEVSVG CTAMSHESES FPKKSRKNAL KVHSRLITKV EICDKKGSNK  420
SQAAAISNHT RKRSNVKKSS ASALLCFQSR ASKEKLEVAI NSGKNLDVSS HDGAGGRMML  480
ALNEEKAAKS FNSGFPNFVR IMRKFNTSGS YTLKIPHQFS AAHLPNCKTE VVLRNSQGEC  540
WTVNSVPDSK GRSVHTFCGG WMAFVRDNDI KMGDVCIFEL VSKCEMLVHI SGVGGKALQL  600
IHEAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-27B3 family protein