PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021640996.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 329aa MW: 37325.1 Da PI: 6.1896

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021640996.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41	3.3e-13	130	181	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ XP_021640996.1 130 QRMTHIAVERNRRKQMNEYLAVLRSLMPPS---YVQRGDQASIIGGAINFVKELE 181 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MALETVVYPQ DPFSYGYRDC YSLPIGGAWG YDFHLQEEDK AFLGIPENSY NNIEQQHGFH 60 ANWDSSSPSV MQHAKDQWDP NSSPETCIID QHLLPPSGVF HPMVPPPATA GRRKRRRTKS 120 TKNMEEIENQ RMTHIAVERN RRKQMNEYLA VLRSLMPPSY VQRGDQASII GGAINFVKEL 180 EQLLQTMEAH KKTKQEPADV SGFSSSPFAE FFAFPQYSTR APATEEESVV DQNQWSMADI 240 EVTMVESHAN LKILSKKRPR QLLKMVAGLQ ALRLSVLHLN VTTVDQLVLY SVSVKVEEGC 300 HLNTVDEIAA AVNQMLHRIH EEETAFSQN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	113	117	RKRRR
2	113	118	RKRRRT
3	131	142	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	3e-93	bHLH family protein