PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021640832.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 722aa    MW: 78457.9 Da    PI: 6.3789
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021640832.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.32.4e-07300320526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                     +C++f++ G C++Gd C +aHg
  XP_021640832.1 300 PCPDFRK-GACRRGDMCEYAHG 320
                     8******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 722 aa     Download sequence    
MNHLTVEIGD SFSCLLDLAA NNDVEGFKLL IERDASSIDE VGYWYGRQKG SKNIVLDHRT  60
PLMVAATYGS LDVLKFILAH TDADINLSCG MDKATALHCA ASGGPLNAVD VVKLLLSAGA  120
DPNCLDGNGY RPIDVIIVPP KLHSLRVALE ELLSNTVSNG SSGEHNSNGF VGEHSSNVSV  180
GDCSHLLMSL RTSNTSSPTL SSSPENGSPS SPSVLVSSPM ASKYNDLPIS TAEKKEYPID  240
PSLPDIKNSI YATDEFRMYS FKVRPCSRAY SHDWTECPFV HPGENARRRD PRKFHYSCVP  300
CPDFRKGACR RGDMCEYAHG VFECWLHPAQ YRTRLCKDGI SCNRRVCFFA HTPEELRPLY  360
VSTGSAVPSP RTSASAASVM DMAAALSLLP GSPSSVSAMS PNPFNQPMSP TATSISHSSV  420
AWPQPNVPTL HLPGSNLQSS RLRSSLSARD IPPEDLNLLP DFDARQQILN DLTCFSQSRN  480
NSASFNRSGW SKVLTPSNLE ELFSAEISSP RYADQAAAVF SPTHKSAVRN QFQQQQSMLS  540
PINTTVFSPM NVEHPLLQAS FGVGSPGRMS PRSVEPISPM GSRLSAFAQR EKQHQQLRSL  600
SSRELGSNNP AASIVGSPAN SWTKWGSPNG KLDWSVNGGD EQGRLRRSSS FELGNNGEEP  660
DLSWVQSLVK ESPPEMLKEK YGVPVSGAAS SGEGLNPNSQ IDSVLESWLE QMQLDQQQEL  720
VV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41900.11e-170C3H family protein