PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021640725.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 814aa    MW: 90074.2 Da    PI: 6.4732
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021640725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.56.1e-2444145199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_021640725.1  44 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 134
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_021640725.1 135 KNQLLLGIRRA 145
                     9999****997 PP
2Auxin_resp120.21.6e-39170253183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdld+vrWpnS+Wrs+k
  XP_021640725.1 170 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVK 253
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 814 aa     Download sequence    
MHADVETDEV YAQMTLQPLS PQEQKDAYLP TELGTSSKQP ANYFCKTLTA SDTSTHGGFS  60
VPRRAAEKVF PPLDFSQQPP AQELIARDLH DNEWKFRHIF RGQPKRHLLT TGWSVFVSAK  120
RLVAGDSVLF IWNEKNQLLL GIRRASRPQT VMPSSVLSSD SMHLGLLAAA AHAAATNSRF  180
TIFYNPRASP SEFVIPLAKY VKAVYHTRVS VGMRFRMLFE TEESSVRRYM GTITGISDLD  240
SVRWPNSHWR SVKVGWDEST AGERQPRVSL WEIEPLTTFP MYPPFPLRLK RPWPPGLPSF  300
HGIKDDDLGM NSPLMWLRGD GDRGIQSMNF QGLGVTPWMQ PRVDASMLSL QTDMYQAMAA  360
AALQEMRAFD PSKSSTASLL QFQQHPNLPR TAALIPPQML QQSQPQPAFL QGVQENQHQP  420
QSQAQTQSHL IQQQLHHPHS LNSQQQQQLP QQQQLVEHQQ IPNVVSTISQ FPSASQSQSP  480
PLQAISSLCQ QQSFSDSNGN PVTSSVVSPL HSLMGSFSQD ESSHLMNLPR TNPLVTSSGW  540
PSKRAAVEPL ISSGAPQGVL PQVQQLGPPQ TNISQSSVSL PPFPGRECSM DQDGGTDPQS  600
HLLFGVNIEP SSLLLQNGMS SLRGVGSDSD STNVPFSSSN YMGNAGTDFS LNPAMTPSSC  660
IDESGFLQSP ENVGQVNPPT RTFVKVYKSG SFGRSLDITK FSSYNELRSE LAHMFGLEGQ  720
LEDPLRSGWQ LVFVDRENDV LLLGDDPWPE FVNSVWCIKI LSPQEVQQMG KRGLELLNSV  780
PIQRLSNGSC DDYASRQDSR NLSTGITSVG SLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein