PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021640724.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 897aa    MW: 99049.4 Da    PI: 6.5435
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021640724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.37e-24127228199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_021640724.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 217
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_021640724.1 218 KNQLLLGIRRA 228
                     9999****997 PP
2Auxin_resp1201.8e-39253336183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdld+vrWpnS+Wrs+k
  XP_021640724.1 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVK 336
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 897 aa     Download sequence    
MRLSSAGFSP QTQEGEKRVL NSELWHACAG PLVSLPAVGS RVVYFPQGHS EQVAASTNKE  60
VDAHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLSPQEQKDA YLPTELGTSS  120
KQPANYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHDNEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRASR PQTVMPSSVL  240
SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDSVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPPFPL RLKRPWPPGL PSFHGIKDDD LGMNSPLMWL RGDGDRGIQS MNFQGLGVTP  420
WMQPRVDASM LSLQTDMYQA MAAAALQEMR AFDPSKSSTA SLLQFQQHPN LPRTAALIPP  480
QMLQQSQPQP AFLQGVQENQ HQPQSQAQTQ SHLIQQQLHH PHSLNSQQQQ QLPQQQQLVE  540
HQQIPNVVST ISQFPSASQS QSPPLQAISS LCQQQSFSDS NGNPVTSSVV SPLHSLMGSF  600
SQDESSHLMN LPRTNPLVTS SGWPSKRAAV EPLISSGAPQ GVLPQVQQLG PPQTNISQSS  660
VSLPPFPGRE CSMDQDGGTD PQSHLLFGVN IEPSSLLLQN GMSSLRGVGS DSDSTNVPFS  720
SSNYMGNAGT DFSLNPAMTP SSCIDESGFL QSPENVGQVN PPTRTFVKVY KSGSFGRSLD  780
ITKFSSYNEL RSELAHMFGL EGQLEDPLRS GWQLVFVDRE NDVLLLGDDP WPEFVNSVWC  840
IKILSPQEVQ QMGKRGLELL NSVPIQRLSN GSCDDYASRQ DSRNLSTGIT SVGSLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein