PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021640197.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 1035aa MW: 114930 Da PI: 7.5989

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021640197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129	1.8e-40	149	226	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C+adl++ak+yhrrhkvC++hska+++lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_021640197.1 149 VCQVEDCRADLTNAKDYHRRHKVCDMHSKANKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHP 226 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1035 aa Download sequence
MEAKIRGKSH NFYGPVVSDL KAVGKKSLEW DLNDWKWDGD LFSATPLNSV PSDCRSRQLF 60 PVGPEIPANG GLFNGSASCS DNNDLGLEKE KRELEKRRRV VLVEDEDFTD EAAGSLNLKL 120 GGQAYPILDE DAKSGKKTKF TGTASNRAVC QVEDCRADLT NAKDYHRRHK VCDMHSKANK 180 ALVGNVMQRF CQQCSRFHVL QEFDEGKRSC RRRLAGHNKR RRKTHPENVV SGGSLNDENG 240 SGYLLISLLR ILSNLHSNSS DQTKDQDLLS HLLRNLANIA GTTSGRSISG LLQESQGRVN 300 AGTTFGALEK VPDMITNGSE STRPSTSASK KDDCTNSQDI MRPLGQCGTV PVSDLAQKRI 360 FNNDFQGETP QAISCLQSTA LFPLRCNLPT KVNEPADVVG RIKYNNIDLN NVYDGSQDCT 420 GNLDMSVAPV NPVTGSVNCP LWVQSDFLKK SPPQMSGNSD STSSQSPSSS NGEAQSRTDR 480 IVFKLFGKDP NDFPVALRTQ ILDWLSHSPT DIESYIRPGC IILTIYLRLG KPQWEEICLN 540 LGTSLSKLLN ASTDSFWRSG WVYARVRHCL SFVYNGQVVL DTPLPLKSHK NCRILSIKPV 600 AVSLSERTHF VVKGVNISRP TTRLLCALEG KYLVQENSCD LMDGADANND HEKIQCLGFP 660 CSIPNITGRG FIEVEDHGLS SSFFPFIVAE QEVCSEIRVL EEAIEVIETV DDVRKNAESI 720 EAKNQALDFI HEMGWLLHRS QLKFRLGHLD PNSDLFPLKR CKWLIEFSIN HDWCAVVKKL 780 LVILFDGTVD TGEHSSIELA LLDMNLLHQA VRRNCRPMVE LLLKFVPDKQ FGRRGPEQKH 840 GVDGENNNFI FKPDVVGPAG LTPLHVAASK DGSENVLDAL TDDPGSVGIE AWRTARDSTG 900 LTPNDYACLR GYYSYIHLVQ RKINKKSENG YVVLDIPKAL LDCNTKQKDE LKSSKIAGLE 960 IGKIKMNTMQ QHCKLCELKL ACGQTRTSLV YRPAMLSMVA IAAVCVCVAL LFKSSPEVLY 1020 VFQPFRWELL KYGSS

Sequence ? help Back to Top

Protein Sequence Length: 1035 aa Download sequence

MEAKIRGKSH NFYGPVVSDL KAVGKKSLEW DLNDWKWDGD LFSATPLNSV PSDCRSRQLF  60
PVGPEIPANG GLFNGSASCS DNNDLGLEKE KRELEKRRRV VLVEDEDFTD EAAGSLNLKL  120
GGQAYPILDE DAKSGKKTKF TGTASNRAVC QVEDCRADLT NAKDYHRRHK VCDMHSKANK  180
ALVGNVMQRF CQQCSRFHVL QEFDEGKRSC RRRLAGHNKR RRKTHPENVV SGGSLNDENG  240
SGYLLISLLR ILSNLHSNSS DQTKDQDLLS HLLRNLANIA GTTSGRSISG LLQESQGRVN  300
AGTTFGALEK VPDMITNGSE STRPSTSASK KDDCTNSQDI MRPLGQCGTV PVSDLAQKRI  360
FNNDFQGETP QAISCLQSTA LFPLRCNLPT KVNEPADVVG RIKYNNIDLN NVYDGSQDCT  420
GNLDMSVAPV NPVTGSVNCP LWVQSDFLKK SPPQMSGNSD STSSQSPSSS NGEAQSRTDR  480
IVFKLFGKDP NDFPVALRTQ ILDWLSHSPT DIESYIRPGC IILTIYLRLG KPQWEEICLN  540
LGTSLSKLLN ASTDSFWRSG WVYARVRHCL SFVYNGQVVL DTPLPLKSHK NCRILSIKPV  600
AVSLSERTHF VVKGVNISRP TTRLLCALEG KYLVQENSCD LMDGADANND HEKIQCLGFP  660
CSIPNITGRG FIEVEDHGLS SSFFPFIVAE QEVCSEIRVL EEAIEVIETV DDVRKNAESI  720
EAKNQALDFI HEMGWLLHRS QLKFRLGHLD PNSDLFPLKR CKWLIEFSIN HDWCAVVKKL  780
LVILFDGTVD TGEHSSIELA LLDMNLLHQA VRRNCRPMVE LLLKFVPDKQ FGRRGPEQKH  840
GVDGENNNFI FKPDVVGPAG LTPLHVAASK DGSENVLDAL TDDPGSVGIE AWRTARDSTG  900
LTPNDYACLR GYYSYIHLVQ RKINKKSENG YVVLDIPKAL LDCNTKQKDE LKSSKIAGLE  960
IGKIKMNTMQ QHCKLCELKL ACGQTRTSLV YRPAMLSMVA IAAVCVCVAL LFKSSPEVLY  1020
VFQPFRWELL KYGSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	96	100	KRRRV
2	219	225	KRRRKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein