PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021639810.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | NF-YC | ||||||||
Protein Properties | Length: 269aa MW: 30121.1 Da PI: 6.4177 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 175.2 | 6.6e-55 | 86 | 190 | 1 | 102 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie++tdfknh+lPlarikki+kadedv+mis+eaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa++rtd+fdfl XP_021639810.1 86 QLQVFWANQmqeIEQTTDFKNHSLPLARIKKIMKADEDVRMISSEAPVIFAKACEVFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFL 180 89******988889********************************************************************************* PP NF-YC 93 vdivprdelk 102 vdi+prdelk XP_021639810.1 181 VDIIPRDELK 190 *******975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 269 aa Download sequence |
MDQSEQTQQR QQSHQPQQQP VMGVVAGAGQ MSYATTPYQT AAMMASGTPA IAVASPTQPS 60 SPFSNSPHQL TYQQAQHFHH QRQQQQLQVF WANQMQEIEQ TTDFKNHSLP LARIKKIMKA 120 DEDVRMISSE APVIFAKACE VFILELTLRS WIHTEENKRR TLQKNDIAAA ISRTDVFDFL 180 VDIIPRDELK EEGLGVTKAT IPMVGSPADM PYYYVPPQHP VGPPGMIMGK PVDQAVVCGA 240 QQPRPPVAFM PWPQTQPQQQ EAHQQPSDT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 159 | 165 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 3e-81 | NF-YC family protein |