PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639568.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 736aa MW: 78150.4 Da PI: 6.1449

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639568.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.6	3.3e-16	467	513	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_021639568.1 467 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 513 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 736 aa Download sequence
MPLSELVYRL AKGKLDSSQE KNLTCSTDLS SGPENDFVEL VWENGQIQSS KTRKIQFSGS 60 FPSQTSKIRD KHVGNGSNTK MGRFGAMDSV VGEVPMSVPS VEMGLNPDDD MVPWLNYPIE 120 DPLQHDYCAE FLTELSGVTV NEDSQTNYAS MEKRNCGNQS VRDPRAASVH NCLSLEQGHM 180 TKVSSKGDVD ANRPRTSSSQ LNPSPSQQCQ TSFPYFRSIV SANNSENINN LTRHAASGDS 240 IGVPPSGGGF PSVKVQKQVP MSSATNSSLM NFSHFSRPAA LVKANLHNIG TRAGSGVSSI 300 ERMASKDKGS IASHSNPAES ILVNPFSGLR KEMSSNCHPV TGSSQVDAKP LDPKPAEESL 360 PAKQPEALDQ EDSKNDKNHC QLAESATQGL VDGEKTAEPL VASSSVCSGN SVERVSDEQT 420 QNLKRKHQET EESEGPSEDV EEESVGAKKA APARAGTGSK RSRAAEVHNL SERRRRDRIN 480 EKMRALQELI PNCNKVDKAS MLDEAIEYLK TLQLQVQIMS MGAGLYMPSM MLPPGMPHMH 540 AGHMLPFSPM GAGMGMGIGM GFGMGMPDMI GGSSGCSMVQ VPPMHGAHFP GPPMSGPSAL 600 HGMGGSNLPI FGLSTQGYPM PYPCAPLMPT SGGPLLKTTM GLNAVGVAGP MDNLDSAPGS 660 SSKDSIKNIN SQAMQNCGAN SSMNQTSSQC QVTNERFEQP ALVQNSGQAS EVTDRGAVKS 720 ANGNDDAPNG ATAGCN

Sequence ? help Back to Top

Protein Sequence Length: 736 aa Download sequence

MPLSELVYRL AKGKLDSSQE KNLTCSTDLS SGPENDFVEL VWENGQIQSS KTRKIQFSGS  60
FPSQTSKIRD KHVGNGSNTK MGRFGAMDSV VGEVPMSVPS VEMGLNPDDD MVPWLNYPIE  120
DPLQHDYCAE FLTELSGVTV NEDSQTNYAS MEKRNCGNQS VRDPRAASVH NCLSLEQGHM  180
TKVSSKGDVD ANRPRTSSSQ LNPSPSQQCQ TSFPYFRSIV SANNSENINN LTRHAASGDS  240
IGVPPSGGGF PSVKVQKQVP MSSATNSSLM NFSHFSRPAA LVKANLHNIG TRAGSGVSSI  300
ERMASKDKGS IASHSNPAES ILVNPFSGLR KEMSSNCHPV TGSSQVDAKP LDPKPAEESL  360
PAKQPEALDQ EDSKNDKNHC QLAESATQGL VDGEKTAEPL VASSSVCSGN SVERVSDEQT  420
QNLKRKHQET EESEGPSEDV EEESVGAKKA APARAGTGSK RSRAAEVHNL SERRRRDRIN  480
EKMRALQELI PNCNKVDKAS MLDEAIEYLK TLQLQVQIMS MGAGLYMPSM MLPPGMPHMH  540
AGHMLPFSPM GAGMGMGIGM GFGMGMPDMI GGSSGCSMVQ VPPMHGAHFP GPPMSGPSAL  600
HGMGGSNLPI FGLSTQGYPM PYPCAPLMPT SGGPLLKTTM GLNAVGVAGP MDNLDSAPGS  660
SSKDSIKNIN SQAMQNCGAN SSMNQTSSQC QVTNERFEQP ALVQNSGQAS EVTDRGAVKS  720
ANGNDDAPNG ATAGCN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	472	477	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	3e-53	bHLH family protein