PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639547.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 506aa MW: 57055.5 Da PI: 6.6479

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639547.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.4	3.1e-24	44	144	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f k+lt sd++++g+l + +k+ae++ ++++++ ++l+ +d++ ++W +++i+r+k++r++lt+GW++Fv++++L +gD+++F + ++ XP_021639547.1 44 FHKTLTASDTSTRGCLFIYRKHAEDClppldmSQQPPR-QELVATDLHRNKWHFRHIFRGKPKRHLLTTGWSSFVSSKKLAAGDVFIFL--RGEN 135 89***************************7434444.59********************************************..4499 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++l v+v+r XP_021639547.1 136 GRLQVGVRR 144 999*997 PP
2	Auxin_resp	96.7	3.4e-32	169	252	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl..sGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F+++Y+Pr+s+s+F+v+v+k+++a k+ +s+G Rfkm+fe+e + e+++ Gt+vg++d+++ rWp+S+Wr+Lk XP_021639547.1 169 ASHAMATGTLFTILYRPRTSRSDFIVSVNKYLEAQKNVFSIGKRFKMRFEGEQVLEQSCtfNGTIVGIEDVSS-RWPGSRWRCLK 252 689****************************************************99899****888.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MFNAEPETDK VYAQIVLLPE LDQAEITSPD PPLPEPETYT THSFHKTLTA SDTSTRGCLF 60 IYRKHAEDCL PPLDMSQQPP RQELVATDLH RNKWHFRHIF RGKPKRHLLT TGWSSFVSSK 120 KLAAGDVFIF LRGENGRLQV GVRRLMRQEI NISSVTSSEN MHVEVLASAS HAMATGTLFT 180 ILYRPRTSRS DFIVSVNKYL EAQKNVFSIG KRFKMRFEGE QVLEQSCTFN GTIVGIEDVS 240 SRWPGSRWRC LKVQWDEASS ISRPESVSPW EVELPVAVTP PNSLPGQGKK RPEFSLRGSS 300 TLDYGMWVFP LESRAFSYYD LDSSSSSSAT SKTSSLGFSG FSSEATLIES SASAADEEPR 360 KVGDACPVLS LDADSGQHSE TSNIICRSEI RATNCEPQKP CQVPQEIEGR QIRKRIKVKM 420 QGIAVRRSVD LTQLECHEDL LRQLEKMFEI EGELIGSTEK WKVVYTDDEG DMMLFGDEPW 480 HEFCSMVREI SIYTTEKVKG KKSRSG

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MFNAEPETDK VYAQIVLLPE LDQAEITSPD PPLPEPETYT THSFHKTLTA SDTSTRGCLF  60
IYRKHAEDCL PPLDMSQQPP RQELVATDLH RNKWHFRHIF RGKPKRHLLT TGWSSFVSSK  120
KLAAGDVFIF LRGENGRLQV GVRRLMRQEI NISSVTSSEN MHVEVLASAS HAMATGTLFT  180
ILYRPRTSRS DFIVSVNKYL EAQKNVFSIG KRFKMRFEGE QVLEQSCTFN GTIVGIEDVS  240
SRWPGSRWRC LKVQWDEASS ISRPESVSPW EVELPVAVTP PNSLPGQGKK RPEFSLRGSS  300
TLDYGMWVFP LESRAFSYYD LDSSSSSSAT SKTSSLGFSG FSSEATLIES SASAADEEPR  360
KVGDACPVLS LDADSGQHSE TSNIICRSEI RATNCEPQKP CQVPQEIEGR QIRKRIKVKM  420
QGIAVRRSVD LTQLECHEDL LRQLEKMFEI EGELIGSTEK WKVVYTDDEG DMMLFGDEPW  480
HEFCSMVREI SIYTTEKVKG KKSRSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46530.1	1e-149	ARF family protein