PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639546.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 583aa MW: 65709.5 Da PI: 6.8235

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639546.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.1	3.9e-24	123	223	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f k+lt sd++++g+l + +k+ae++ ++++++ ++l+ +d++ ++W +++i+r+k++r++lt+GW++Fv++++L +gD+++F + ++ XP_021639546.1 123 FHKTLTASDTSTRGCLFIYRKHAEDClppldmSQQPPR-QELVATDLHRNKWHFRHIFRGKPKRHLLTTGWSSFVSSKKLAAGDVFIFL--RGEN 214 89***************************7434444.59********************************************..4499 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++l v+v+r XP_021639546.1 215 GRLQVGVRR 223 999*997 PP
2	Auxin_resp	100.1	3e-33	248	329	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F+++Y+Pr+s+s+F+v+v+k+++a k+ +s+G Rfkm+fe+e + e+++ Gt+vg++d+++ rWp+S+Wr+Lk XP_021639546.1 248 ASHAMATGTLFTILYRPRTSRSDFIVSVNKYLEAQKNVFSIGKRFKMRFEGEQVLEQSFNGTIVGIEDVSS-RWPGSRWRCLK 329 689***************************************************************888.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MASKTTNHFT GGGCDYALYK ELWHACAGPL VTLPRAGERV YYFPQGHMEQ LGAPVHEGLE 60 QEMLPFNLPS KILCRVIYVQ RMAEPETDKV YAQIVLLPEL DQAEITSPDP PLPEPETYTT 120 HSFHKTLTAS DTSTRGCLFI YRKHAEDCLP PLDMSQQPPR QELVATDLHR NKWHFRHIFR 180 GKPKRHLLTT GWSSFVSSKK LAAGDVFIFL RGENGRLQVG VRRLMRQEIN ISSVTSSENM 240 HVEVLASASH AMATGTLFTI LYRPRTSRSD FIVSVNKYLE AQKNVFSIGK RFKMRFEGEQ 300 VLEQSFNGTI VGIEDVSSRW PGSRWRCLKV QWDEASSISR PESVSPWEVE LPVAVTPPNS 360 LPGQGKKRPE FSLRGSSTLD YGMWVFPLES RAFSYYDLDS SSSSSATSKT SSLGFSGFSS 420 EATLIESSAS AADEEPRKVG DACPVLSLDA DSGQHSETSN IICRSEIRAT NCEPQKPCQV 480 PQEIEGRQIR KRIKVKMQGI AVRRSVDLTQ LECHEDLLRQ LEKMFEIEGE LIGSTEKWKV 540 VYTDDEGDMM LFGDEPWHEF CSMVREISIY TTEKVKGKKS RSG

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MASKTTNHFT GGGCDYALYK ELWHACAGPL VTLPRAGERV YYFPQGHMEQ LGAPVHEGLE  60
QEMLPFNLPS KILCRVIYVQ RMAEPETDKV YAQIVLLPEL DQAEITSPDP PLPEPETYTT  120
HSFHKTLTAS DTSTRGCLFI YRKHAEDCLP PLDMSQQPPR QELVATDLHR NKWHFRHIFR  180
GKPKRHLLTT GWSSFVSSKK LAAGDVFIFL RGENGRLQVG VRRLMRQEIN ISSVTSSENM  240
HVEVLASASH AMATGTLFTI LYRPRTSRSD FIVSVNKYLE AQKNVFSIGK RFKMRFEGEQ  300
VLEQSFNGTI VGIEDVSSRW PGSRWRCLKV QWDEASSISR PESVSPWEVE LPVAVTPPNS  360
LPGQGKKRPE FSLRGSSTLD YGMWVFPLES RAFSYYDLDS SSSSSATSKT SSLGFSGFSS  420
EATLIESSAS AADEEPRKVG DACPVLSLDA DSGQHSETSN IICRSEIRAT NCEPQKPCQV  480
PQEIEGRQIR KRIKVKMQGI AVRRSVDLTQ LECHEDLLRQ LEKMFEIEGE LIGSTEKWKV  540
VYTDDEGDMM LFGDEPWHEF CSMVREISIY TTEKVKGKKS RSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46530.1	0.0	ARF family protein