PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021639545.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 585aa    MW: 65913.8 Da    PI: 6.8212
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021639545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.13.9e-24123223198
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f k+lt sd++++g+l + +k+ae++      ++++++ ++l+ +d++ ++W +++i+r+k++r++lt+GW++Fv++++L +gD+++F   + ++
  XP_021639545.1 123 FHKTLTASDTSTRGCLFIYRKHAEDClppldmSQQPPR-QELVATDLHRNKWHFRHIFRGKPKRHLLTTGWSSFVSSKKLAAGDVFIFL--RGEN 214
                     89*****************************7434444.59************************************************..4499 PP

                     E..EEEEE- CS
              B3  90 felvvkvfr 98 
                     ++l v+v+r
  XP_021639545.1 215 GRLQVGVRR 223
                     999***997 PP
2Auxin_resp96.44.3e-32248331183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl..sGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha++t++ F+++Y+Pr+s+s+F+v+v+k+++a k+ +s+G Rfkm+fe+e + e+++   Gt+vg++d+++ rWp+S+Wr+Lk
  XP_021639545.1 248 ASHAMATGTLFTILYRPRTSRSDFIVSVNKYLEAQKNVFSIGKRFKMRFEGEQVLEQSCtfNGTIVGIEDVSS-RWPGSRWRCLK 331
                     689******************************************************99899********888.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 585 aa     Download sequence    
MASKTTNHFT GGGCDYALYK ELWHACAGPL VTLPRAGERV YYFPQGHMEQ LGAPVHEGLE  60
QEMLPFNLPS KILCRVIYVQ RMAEPETDKV YAQIVLLPEL DQAEITSPDP PLPEPETYTT  120
HSFHKTLTAS DTSTRGCLFI YRKHAEDCLP PLDMSQQPPR QELVATDLHR NKWHFRHIFR  180
GKPKRHLLTT GWSSFVSSKK LAAGDVFIFL RGENGRLQVG VRRLMRQEIN ISSVTSSENM  240
HVEVLASASH AMATGTLFTI LYRPRTSRSD FIVSVNKYLE AQKNVFSIGK RFKMRFEGEQ  300
VLEQSCTFNG TIVGIEDVSS RWPGSRWRCL KVQWDEASSI SRPESVSPWE VELPVAVTPP  360
NSLPGQGKKR PEFSLRGSST LDYGMWVFPL ESRAFSYYDL DSSSSSSATS KTSSLGFSGF  420
SSEATLIESS ASAADEEPRK VGDACPVLSL DADSGQHSET SNIICRSEIR ATNCEPQKPC  480
QVPQEIEGRQ IRKRIKVKMQ GIAVRRSVDL TQLECHEDLL RQLEKMFEIE GELIGSTEKW  540
KVVYTDDEGD MMLFGDEPWH EFCSMVREIS IYTTEKVKGK KSRSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46530.10.0ARF family protein