PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639543.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 638aa MW: 72356.1 Da PI: 6.2167

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639543.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	65.2	9.6e-21	62	164	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--..TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk..egDfvvFkldgr 87 f+k+lt sdv+k+g l + k+aee+ + +++ ++l+ +d++g++W +++iyr++++r++lt+GW eFv +++L ++ +++F ++ XP_021639543.1 62 FQKTLTASDVSKHGSLFIYQKHAEEClppldmS-QEPPCQQLVAKDLHGKQWHFQHIYRGNPKRHLLTTGWGEFVGSKKLAkaTRSVLIFL--RE 153 99***************************54.4444569999**********************************97788899999..56 PP SEE..EEEEE- CS B3 88 sefelvvkvfr 98 +++el+++v++ XP_021639543.1 154 ENGELRIGVRK 164 99999999986 PP
2	Auxin_resp	61.6	3.1e-21	188	282	2	83
Auxin_resp 2 ahaastksvFevvYnPrast.............seFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 ha+ t++ F v+Y+Pr+st s+F+v+v+ +++a k ++ GmRf m+fe+e+ e+++ G +v +d ++rWp+S+Wrs+k XP_021639543.1 188 YHAMMTRNHFYVIYRPRTSTlkiifniifrttgSQFIVSVNMYREAQKPNLFNGMRFMMKFEGEEGCEKSFNGRIVHFQDNISSRWPDSEWRSIK 282 5677777777777777766444444444444449**********************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MPPSNLPSKI LCKVIKVDLQ ADPKTDQVCA YISLLPEPDQ REVPGPNPEI LKPAERCMIH 60 SFQKTLTASD VSKHGSLFIY QKHAEECLPP LDMSQEPPCQ QLVAKDLHGK QWHFQHIYRG 120 NPKRHLLTTG WGEFVGSKKL AKATRSVLIF LREENGELRI GVRKPMGQET DVVKHGESIC 180 SGILSNAYHA MMTRNHFYVI YRPRTSTLKI IFNIIFRTTG SQFIVSVNMY REAQKPNLFN 240 GMRFMMKFEG EEGCEKSFNG RIVHFQDNIS SRWPDSEWRS IKVQWDKPCP PFLPERVSPW 300 ELELSSQPKQ RKKRAQVGFI GDASQLKRTK GKGKFKEICS TVYEKGECSN VIQGNFIAQS 360 TRAHVSERDG TEKEGETEMN ICVANAHGDV IPQENSGPTE KNGHRDGIGV IDDETNVQCQ 420 DKEYDGILDE SLTDIEKRGP TTPASAEYPI LPEIHTLDVL PSDSPVFPTS QGERVEYSRQ 480 YSLDDCYEDF YGFQVLQTHV SDLQRIYCIE GKFWENSRFQ RAYLISAVLE GLGLALSLKD 540 RTWKSLSPDE LQTIIQGIED ALNAGFKLDC LKPVVQKAKA VSGSFDTRCQ FEALEEEKSS 600 LETRLQNVIC QLQTLDIELR SSTEGLDFES KCLANIFD

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MPPSNLPSKI LCKVIKVDLQ ADPKTDQVCA YISLLPEPDQ REVPGPNPEI LKPAERCMIH  60
SFQKTLTASD VSKHGSLFIY QKHAEECLPP LDMSQEPPCQ QLVAKDLHGK QWHFQHIYRG  120
NPKRHLLTTG WGEFVGSKKL AKATRSVLIF LREENGELRI GVRKPMGQET DVVKHGESIC  180
SGILSNAYHA MMTRNHFYVI YRPRTSTLKI IFNIIFRTTG SQFIVSVNMY REAQKPNLFN  240
GMRFMMKFEG EEGCEKSFNG RIVHFQDNIS SRWPDSEWRS IKVQWDKPCP PFLPERVSPW  300
ELELSSQPKQ RKKRAQVGFI GDASQLKRTK GKGKFKEICS TVYEKGECSN VIQGNFIAQS  360
TRAHVSERDG TEKEGETEMN ICVANAHGDV IPQENSGPTE KNGHRDGIGV IDDETNVQCQ  420
DKEYDGILDE SLTDIEKRGP TTPASAEYPI LPEIHTLDVL PSDSPVFPTS QGERVEYSRQ  480
YSLDDCYEDF YGFQVLQTHV SDLQRIYCIE GKFWENSRFQ RAYLISAVLE GLGLALSLKD  540
RTWKSLSPDE LQTIIQGIED ALNAGFKLDC LKPVVQKAKA VSGSFDTRCQ FEALEEEKSS  600
LETRLQNVIC QLQTLDIELR SSTEGLDFES KCLANIFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	1e-108	ARF family protein