PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639542.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 693aa MW: 78291.5 Da PI: 5.7936

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639542.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	65.1	1.1e-20	130	232	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--..TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk..egDfvvFkldgr 87 f+k+lt sdv+k+g l + k+aee+ + +++ ++l+ +d++g++W +++iyr++++r++lt+GW eFv +++L ++ +++F ++ XP_021639542.1 130 FQKTLTASDVSKHGSLFIYQKHAEEClppldmS-QEPPCQQLVAKDLHGKQWHFQHIYRGNPKRHLLTTGWGEFVGSKKLAkaTRSVLIFL--RE 221 99***************************54.4444569999**********************************97788899999..56 PP SEE..EEEEE- CS B3 88 sefelvvkvfr 98 +++el+++v++ XP_021639542.1 222 ENGELRIGVRK 232 99999999986 PP
2	Auxin_resp	80	5.7e-27	255	337	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a ha+ t++ F v+Y+Pr++ s+F+v+v+ +++a k ++ GmRf m+fe+e+ e+++ G +v +d ++rWp+S+Wrs+k XP_021639542.1 255 AYHAMMTRNHFYVIYRPRTTGSQFIVSVNMYREAQKPNLFNGMRFMMKFEGEEGCEKSFNGRIVHFQDNISSRWPDSEWRSIK 337 67999***************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MASVAMNHST EGHPQDGGCN DALYKQLWHA CAGPLVSLPF VGEQVYYFPQ GHIEHELGAL 60 VHQDLEQQMP PSNLPSKILC KVIKVDLQAD PKTDQVCAYI SLLPEPDQRE VPGPNPEILK 120 PAERCMIHSF QKTLTASDVS KHGSLFIYQK HAEECLPPLD MSQEPPCQQL VAKDLHGKQW 180 HFQHIYRGNP KRHLLTTGWG EFVGSKKLAK ATRSVLIFLR EENGELRIGV RKPMGQETDV 240 VKHGESICSG ILSNAYHAMM TRNHFYVIYR PRTTGSQFIV SVNMYREAQK PNLFNGMRFM 300 MKFEGEEGCE KSFNGRIVHF QDNISSRWPD SEWRSIKVQW DKPCPPFLPE RVSPWELELS 360 SQPKQRKKRA QVGFIGDASQ LKRTKGKGKF KEICSTVYEK GECSNVIQGN FIAQSTRAHV 420 SERDGTEKEG ETEMNICVAN AHGDVIPQEN SGPTEKNGHR DGIGVIDDET NVQCQDKEYD 480 GILDESLTDI EKRGPTTPAS AEYPILPEIH TLDVLPSDSP VFPTSQGERV EYSRQYSLDD 540 CYEDFYGFQV LQTHVSDLQR IYCIEGKFWE NSRFQRAYLI SAVLEGLGLA LSLKDRTWKS 600 LSPDELQTII QGIEDALNAG FKLDCLKPVV QKAKAVSGSF DTRCQFEALE EEKSSLETRL 660 QNVICQLQTL DIELRSSTEG LDFESKCLAN IFD

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MASVAMNHST EGHPQDGGCN DALYKQLWHA CAGPLVSLPF VGEQVYYFPQ GHIEHELGAL  60
VHQDLEQQMP PSNLPSKILC KVIKVDLQAD PKTDQVCAYI SLLPEPDQRE VPGPNPEILK  120
PAERCMIHSF QKTLTASDVS KHGSLFIYQK HAEECLPPLD MSQEPPCQQL VAKDLHGKQW  180
HFQHIYRGNP KRHLLTTGWG EFVGSKKLAK ATRSVLIFLR EENGELRIGV RKPMGQETDV  240
VKHGESICSG ILSNAYHAMM TRNHFYVIYR PRTTGSQFIV SVNMYREAQK PNLFNGMRFM  300
MKFEGEEGCE KSFNGRIVHF QDNISSRWPD SEWRSIKVQW DKPCPPFLPE RVSPWELELS  360
SQPKQRKKRA QVGFIGDASQ LKRTKGKGKF KEICSTVYEK GECSNVIQGN FIAQSTRAHV  420
SERDGTEKEG ETEMNICVAN AHGDVIPQEN SGPTEKNGHR DGIGVIDDET NVQCQDKEYD  480
GILDESLTDI EKRGPTTPAS AEYPILPEIH TLDVLPSDSP VFPTSQGERV EYSRQYSLDD  540
CYEDFYGFQV LQTHVSDLQR IYCIEGKFWE NSRFQRAYLI SAVLEGLGLA LSLKDRTWKS  600
LSPDELQTII QGIEDALNAG FKLDCLKPVV QKAKAVSGSF DTRCQFEALE EEKSSLETRL  660
QNVICQLQTL DIELRSSTEG LDFESKCLAN IFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	1e-139	ARF family protein