PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639534.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 679aa MW: 75798.5 Da PI: 6.0974

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639534.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.8	1.8e-22	128	228	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++ +++a+++ +++ ++l+ +d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + + XP_021639534.1 128 FCKTLTASDTSTHGGFSVLRRHADDClppldmsQQP--PWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFL--RGE 218 99**************************964333..4459********************************************..449 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 ++el+v+v+r XP_021639534.1 219 NGELRVGVRR 228 999***97 PP
2	Auxin_resp	111	1.1e-36	254	336	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F+v+Y+Pr+s+seF+v+v+k+++a ++k+svGmRfkm+fe+e+++err+sGt+vgv d ++ W +S+WrsLk XP_021639534.1 254 ASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDNMSSGWADSEWRSLK 336 789******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 679 aa Download sequence
MAFTSTNHTP VGHPHTGGCN DALYKELWHA CAGPLVNLPR DGERVYYFPQ GHMEQLEASM 60 HQGLEQQMPS FNLPSKILCK VVNVQRRAEP ETDEVYAQIT LLPEPDQSEV TSPDPPLPEP 120 ERCTIHSFCK TLTASDTSTH GGFSVLRRHA DDCLPPLDMS QQPPWQELVA TDLHGNEWHF 180 RHIFRGQPRR HLLTTGWSVF VSSKKLVAGD AFIFLRGENG ELRVGVRRLM RQQINMPSSV 240 ISSQSMHLGV LATASHAIAT GTLFSVFYKP RTSRSEFIVS VNKYLEARSH KLSVGMRFKM 300 RFEGEEVPER RFSGTIVGVG DNMSSGWADS EWRSLKVQWD EPSSILRPDR VSPWELEPLV 360 ATTPSNSQPV QRNKRARPSV LPSPTPDLSA LGMWKPPTES PALSYGDSHR GRDLYPSPNF 420 STTAKAKSLG FCGNSPLPAV SPNSMYWPNR VESVTDSVVP VINKDSGERK QSTGTGYRLF 480 GIQLVDNSNV EQTSPLPVTS GMVDDCPIVS LDAESDRHSE PSNVNRSEIP SVSCEPEKSC 540 LRSPQELQSR QIRSCTKVHM QGIAVGRAVD LTRFESYEDL LRKLEDMFDI EGELSGSTKK 600 WQVVYTDDED DMMMVGDDPW HEFCSMVRKI FIYTSEEVKK LSPKIKLPVN EEIKATKADT 660 EPDTAVNMDD QSSVVGPGC

Sequence ? help Back to Top

Protein Sequence Length: 679 aa Download sequence

MAFTSTNHTP VGHPHTGGCN DALYKELWHA CAGPLVNLPR DGERVYYFPQ GHMEQLEASM  60
HQGLEQQMPS FNLPSKILCK VVNVQRRAEP ETDEVYAQIT LLPEPDQSEV TSPDPPLPEP  120
ERCTIHSFCK TLTASDTSTH GGFSVLRRHA DDCLPPLDMS QQPPWQELVA TDLHGNEWHF  180
RHIFRGQPRR HLLTTGWSVF VSSKKLVAGD AFIFLRGENG ELRVGVRRLM RQQINMPSSV  240
ISSQSMHLGV LATASHAIAT GTLFSVFYKP RTSRSEFIVS VNKYLEARSH KLSVGMRFKM  300
RFEGEEVPER RFSGTIVGVG DNMSSGWADS EWRSLKVQWD EPSSILRPDR VSPWELEPLV  360
ATTPSNSQPV QRNKRARPSV LPSPTPDLSA LGMWKPPTES PALSYGDSHR GRDLYPSPNF  420
STTAKAKSLG FCGNSPLPAV SPNSMYWPNR VESVTDSVVP VINKDSGERK QSTGTGYRLF  480
GIQLVDNSNV EQTSPLPVTS GMVDDCPIVS LDAESDRHSE PSNVNRSEIP SVSCEPEKSC  540
LRSPQELQSR QIRSCTKVHM QGIAVGRAVD LTRFESYEDL LRKLEDMFDI EGELSGSTKK  600
WQVVYTDDED DMMMVGDDPW HEFCSMVRKI FIYTSEEVKK LSPKIKLPVN EEIKATKADT  660
EPDTAVNMDD QSSVVGPGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	0.0	ARF family protein