PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021639533.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 726aa    MW: 81349.1 Da    PI: 6.0502
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021639533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B370.62e-22175275198
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++ +++a+++       +++    ++l+ +d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F   + +
  XP_021639533.1 175 FCKTLTASDTSTHGGFSVLRRHADDClppldmsQQP--PWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFL--RGE 265
                     99****************************964333..4459************************************************..449 PP

                     EE..EEEEE- CS
              B3  89 efelvvkvfr 98 
                     ++el+v+v+r
  XP_021639533.1 266 NGELRVGVRR 275
                     999*****97 PP
2Auxin_resp110.91.3e-36301383183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha++t++ F+v+Y+Pr+s+seF+v+v+k+++a ++k+svGmRfkm+fe+e+++err+sGt+vgv d  ++ W +S+WrsLk
  XP_021639533.1 301 ASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDNMSSGWADSEWRSLK 383
                     789******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 726 aa     Download sequence    
MAFTSTNHTP VGHPHTGGCN DALYKELWHA CAGPLVNLPR DGERVYYFPQ GHMEQLEASM  60
HQGLEQQMPS FNLPSKILCK VVNVQRRVGL LVILLILLVD FGESWYCFFG LQSFVIFLQF  120
HQFCFICYFH CGLQAEPETD EVYAQITLLP EPDQSEVTSP DPPLPEPERC TIHSFCKTLT  180
ASDTSTHGGF SVLRRHADDC LPPLDMSQQP PWQELVATDL HGNEWHFRHI FRGQPRRHLL  240
TTGWSVFVSS KKLVAGDAFI FLRGENGELR VGVRRLMRQQ INMPSSVISS QSMHLGVLAT  300
ASHAIATGTL FSVFYKPRTS RSEFIVSVNK YLEARSHKLS VGMRFKMRFE GEEVPERRFS  360
GTIVGVGDNM SSGWADSEWR SLKVQWDEPS SILRPDRVSP WELEPLVATT PSNSQPVQRN  420
KRARPSVLPS PTPDLSALGM WKPPTESPAL SYGDSHRGRD LYPSPNFSTT AKAKSLGFCG  480
NSPLPAVSPN SMYWPNRVES VTDSVVPVIN KDSGERKQST GTGYRLFGIQ LVDNSNVEQT  540
SPLPVTSGMV DDCPIVSLDA ESDRHSEPSN VNRSEIPSVS CEPEKSCLRS PQELQSRQIR  600
SCTKVHMQGI AVGRAVDLTR FESYEDLLRK LEDMFDIEGE LSGSTKKWQV VYTDDEDDMM  660
MVGDDPWHEF CSMVRKIFIY TSEEVKKLSP KIKLPVNEEI KATKADTEPD TAVNMDDQSS  720
VVGPGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.40.0ARF family protein