PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021639460.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 196aa    MW: 21562.5 Da    PI: 6.7213
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021639460.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260135.81.5e-42341331100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++Cvlapyfp ++++kf+++h++FGas+++k+l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q+++l+a+la
  XP_021639460.1  34 PCAACKILRRRCAENCVLAPYFPPTERAKFKIAHRVFGASKIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKQVNELQAQLA 128
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_021639460.1 129 KAQAE 133
                     *9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MDHTEAANSN SNSTSPSSSS SPPPPLPPAV VLRPCAACKI LRRRCAENCV LAPYFPPTER  60
AKFKIAHRVF GASKIIKFLQ ELPESQRADA VSSMVYEASA RIRDPVYGCA GAICHLQKQV  120
NELQAQLAKA QAELVNMQCQ QANLVALLCM EMAQSPQQSS EQSVDNFIST PQSYQSNPCF  180
MEDNNNFGSL WEPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.11e-66LBD family protein