PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639444.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 566aa MW: 61780.8 Da PI: 4.9493

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639444.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.6e-17	40	87	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +l+++vk++G g+W+++ ++ g+ R++k+c++rw ++l XP_021639444.1 40 KGPWTSAEDGILIEYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 87 79******************************************9986 PP
2	Myb_DNA-binding	53.9	4.2e-17	93	136	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE++l++++++++G++ W++ a++++ gRt++++k++w++ XP_021639444.1 93 KGAFTQEEEQLIIELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 136 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MSHTTNESDD GVLSRDQIEP PLAEEGSSGG SANGGVVLKK GPWTSAEDGI LIEYVKKHGE 60 GNWNAVQKHS GLSRCGKSCR LRWANHLRPN LKKGAFTQEE EQLIIELHAK MGNKWARMAA 120 HLPGRTDNEI KNYWNTRIKR RQRAGLPLYP PEISFQASQE RQLGLNVSGI NTRDKDHQDL 180 LRTNSYEIPD VIFDSLKANH DISPYVPELP GITASSILVK SLSSSQYGSF MSPTMHRQKR 240 LRESMTLIPG YSGSVKTDSP LFDQFQDNSF DKIAQSFGLC FPFDADPTNK NPQSFGGNRG 300 SHTLANGNFS ASKPTSGLVK MELPSLQYPE DGLGSWGTSP PPLLETVDTF IQSPPTGTVE 360 SSPRNSGLLD ALLHEAKTLS STKNHSSDKS SNSSTVIPGE LAESSALNIC ETEWEDLGDP 420 LSPLGQTATS LFTECPPIST CGSSLDEPPA TETLTGCNAK SEIADQAWSP EREKETTTLL 480 DVTRPDILLA SDWLEKGSGY IKDQVVMMDN IATFLGDDLS SDYKQMSAGA STSNQGWRLG 540 SCVWNNMPAV CQMSELPSEN CYLSNL

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MSHTTNESDD GVLSRDQIEP PLAEEGSSGG SANGGVVLKK GPWTSAEDGI LIEYVKKHGE  60
GNWNAVQKHS GLSRCGKSCR LRWANHLRPN LKKGAFTQEE EQLIIELHAK MGNKWARMAA  120
HLPGRTDNEI KNYWNTRIKR RQRAGLPLYP PEISFQASQE RQLGLNVSGI NTRDKDHQDL  180
LRTNSYEIPD VIFDSLKANH DISPYVPELP GITASSILVK SLSSSQYGSF MSPTMHRQKR  240
LRESMTLIPG YSGSVKTDSP LFDQFQDNSF DKIAQSFGLC FPFDADPTNK NPQSFGGNRG  300
SHTLANGNFS ASKPTSGLVK MELPSLQYPE DGLGSWGTSP PPLLETVDTF IQSPPTGTVE  360
SSPRNSGLLD ALLHEAKTLS STKNHSSDKS SNSSTVIPGE LAESSALNIC ETEWEDLGDP  420
LSPLGQTATS LFTECPPIST CGSSLDEPPA TETLTGCNAK SEIADQAWSP EREKETTTLL  480
DVTRPDILLA SDWLEKGSGY IKDQVVMMDN IATFLGDDLS SDYKQMSAGA STSNQGWRLG  540
SCVWNNMPAV CQMSELPSEN CYLSNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	1e-141	MYB family protein