PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639356.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 752aa MW: 79734.4 Da PI: 6.1453

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639356.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.6	3.4e-16	493	539	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_021639356.1 493 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 539 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MGQALKLKCL EGTNNGEVIE ICQPFTMPLS ELVYRLAKGK LDSSQEKNLT CSTDLSSGPE 60 NDFVELVWEN GQIQSSKTRK IQFSGSFPSQ TSKIRDKHVG NGSNTKMGRF GAMDSVVGEV 120 PMSVPSVEMG LNPDDDMVPW LNYPIEDPLQ HDYCAEFLTE LSGVTVNEDS QTNYASMEKR 180 NCGNQSVRDP RAASVHNCLS LEQGHMTKVS SKGDVDANRP RTSSSQLNPS PSQQCQTSFP 240 YFRSIVSANN SENINNLTRH AASGDSIGVP PSGGGFPSVK VQKQVPMSSA TNSSLMNFSH 300 FSRPAALVKA NLHNIGTRAG SGVSSIERMA SKDKGSIASH SNPAESILVN PFSGLRKEMS 360 SNCHPVTGSS QVDAKPLDPK PAEESLPAKQ PEALDQEDSK NDKNHCQLAE SATQGLVDGE 420 KTAEPLVASS SVCSGNSVER VSDEQTQNLK RKHQETEESE GPSEDVEEES VGAKKAAPAR 480 AGTGSKRSRA AEVHNLSERR RRDRINEKMR ALQELIPNCN KVDKASMLDE AIEYLKTLQL 540 QVQIMSMGAG LYMPSMMLPP GMPHMHAGHM LPFSPMGAGM GMGIGMGFGM GMPDMIGGSS 600 GCSMVQVPPM HGAHFPGPPM SGPSALHGMG GSNLPIFGLS TQGYPMPYPC APLMPTSGGP 660 LLKTTMGLNA VGVAGPMDNL DSAPGSSSKD SIKNINSQAM QNCGANSSMN QTSSQPALVQ 720 NSGQASEVTD RGAVKSANGN DDAPNGATAG CN

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MGQALKLKCL EGTNNGEVIE ICQPFTMPLS ELVYRLAKGK LDSSQEKNLT CSTDLSSGPE  60
NDFVELVWEN GQIQSSKTRK IQFSGSFPSQ TSKIRDKHVG NGSNTKMGRF GAMDSVVGEV  120
PMSVPSVEMG LNPDDDMVPW LNYPIEDPLQ HDYCAEFLTE LSGVTVNEDS QTNYASMEKR  180
NCGNQSVRDP RAASVHNCLS LEQGHMTKVS SKGDVDANRP RTSSSQLNPS PSQQCQTSFP  240
YFRSIVSANN SENINNLTRH AASGDSIGVP PSGGGFPSVK VQKQVPMSSA TNSSLMNFSH  300
FSRPAALVKA NLHNIGTRAG SGVSSIERMA SKDKGSIASH SNPAESILVN PFSGLRKEMS  360
SNCHPVTGSS QVDAKPLDPK PAEESLPAKQ PEALDQEDSK NDKNHCQLAE SATQGLVDGE  420
KTAEPLVASS SVCSGNSVER VSDEQTQNLK RKHQETEESE GPSEDVEEES VGAKKAAPAR  480
AGTGSKRSRA AEVHNLSERR RRDRINEKMR ALQELIPNCN KVDKASMLDE AIEYLKTLQL  540
QVQIMSMGAG LYMPSMMLPP GMPHMHAGHM LPFSPMGAGM GMGIGMGFGM GMPDMIGGSS  600
GCSMVQVPPM HGAHFPGPPM SGPSALHGMG GSNLPIFGLS TQGYPMPYPC APLMPTSGGP  660
LLKTTMGLNA VGVAGPMDNL DSAPGSSSKD SIKNINSQAM QNCGANSSMN QTSSQPALVQ  720
NSGQASEVTD RGAVKSANGN DDAPNGATAG CN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	498	503	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	3e-53	bHLH family protein