PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021639354.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 265aa    MW: 29885.1 Da    PI: 9.1258
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021639354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF71.85.7e-2375120247
                     ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
          SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47 
                     ++e +  r+vtfskR+ngi+KKA ELS+LC+a+vavi+fs++gk++
  XP_021639354.1  75 KVEKENSRYVTFSKRKNGIFKKATELSTLCGADVAVILFSEHGKVF 120
                     6788899************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MTVDLQYLRR GVYPKTPTIE NLSSVLPSIN SSTHSKRLGP KSCPVSCTIL TAMDGTTDQR  60
PIKKSRGRQK IEIKKVEKEN SRYVTFSKRK NGIFKKATEL STLCGADVAV ILFSEHGKVF  120
SCGNPNVEKV LDRYLAEKEE KSCILEIGSN GSGVTQTTLQ ERDYKKSLSR LEEMKRAFTM  180
ISKNSNMNKG EFWWDLPIDN MEKEELESYR ESLEELKKNV MTRIEGMAAH NAAGESSIIN  240
QFINHNGVWN NSIVTYDAGL NNGFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.16e-26M-type_MADS family protein