PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021639112.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GATA

Protein Properties

Length: 542aa MW: 60106.4 Da PI: 7.3167

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021639112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	45.4	1.1e-14	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ XP_021639112.1 7 CCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41 99************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MGKQGPCCHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RTDPDDYEDH 60 RVSRVKSISI NKNKEVKLLK RKANHDNGVV GGVASDYIQG YRKVLDEDAS NRSSSGSAIS 120 NSESCAQFGS ADASDLTGPA QSVVWDTMVP SRKRTCVNRS KPSPVEKLTR DLYTIWHEQQ 180 SSCFSGSSDE DLLFESETPM VSVEIGHGSV LIRHPSSIAR DEESEASSLS VENKQYSANE 240 AYSHSVTLPV HNENKSVNMQ SLVIEKSKNP AGPGMQQEQF KRDKSKHERA QVLGNHNSPL 300 CNVDLNDIIN FEEFTRYLTN EEQQQLLKYL PPVDTAKLPE SIRSMFDSPQ LKENISCFQQ 360 LLGEGVFDLS MSGVKTEDCN TLKRLTLSNL SKSKWMEHYH QLKKCKNTTG KSLVGRAPNG 420 ITSNNLIATK RSRDTLGQKI PEVKVMKSPK RINMKAIYEN KEVMDNDGSC FSPRSLFALP 480 PDGGSLMLDS FHYVDESSDQ DLLLDVPSNG SFPQAELLNP TLSFGQQAST SSSSTYPYLV 540 RP

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MGKQGPCCHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RTDPDDYEDH  60
RVSRVKSISI NKNKEVKLLK RKANHDNGVV GGVASDYIQG YRKVLDEDAS NRSSSGSAIS  120
NSESCAQFGS ADASDLTGPA QSVVWDTMVP SRKRTCVNRS KPSPVEKLTR DLYTIWHEQQ  180
SSCFSGSSDE DLLFESETPM VSVEIGHGSV LIRHPSSIAR DEESEASSLS VENKQYSANE  240
AYSHSVTLPV HNENKSVNMQ SLVIEKSKNP AGPGMQQEQF KRDKSKHERA QVLGNHNSPL  300
CNVDLNDIIN FEEFTRYLTN EEQQQLLKYL PPVDTAKLPE SIRSMFDSPQ LKENISCFQQ  360
LLGEGVFDLS MSGVKTEDCN TLKRLTLSNL SKSKWMEHYH QLKKCKNTTG KSLVGRAPNG  420
ITSNNLIATK RSRDTLGQKI PEVKVMKSPK RINMKAIYEN KEVMDNDGSC FSPRSLFALP  480
PDGGSLMLDS FHYVDESSDQ DLLLDVPSNG SFPQAELLNP TLSFGQQAST SSSSTYPYLV  540
RP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-164	GATA family protein