PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638553.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 772aa MW: 82212.1 Da PI: 5.9445

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638553.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.6	3.5e-16	493	539	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_021638553.1 493 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 539 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 772 aa Download sequence
MGQALKLKCL EGTNNGEVIE ICQPFTMPLS ELVYRLAKGK LDSSQEKNLT CSTDLSSGPE 60 NDFVELVWEN GQIQSSKTRK IQFSGSFASQ TSKIRDKDVG NGSNTKMGRF GAMDSVVGEV 120 PMSVPSVEMG LNQDDDMVPW LNYPIEDPLQ HDYCAEFLTE LSGVTVNEDS QTNYASMEKR 180 NCGNQSVRDP RAASVHNCLS LEQGHMTKVS SKGDVDANRP RTSSSQLNPS PSQQCQTSFP 240 YFRSIVSANN SENINNLSRH AASGDSIGVP PSGGGFPSVK VQKQVPMSSA TNSSLMNFSH 300 FSRPPALVKA NLHNIGTRAG SGVSSIERMA SKDKGSIASH SNPAESILVN PFSGLRKELS 360 SNCHPVTGSS KVDAKPLDPK PAEESLPAKQ PEALDQEDSK NDKNHCQLAE SATQGLVDGE 420 KTAEPLVASS SVCSGNSVER VSDEQTQNLK RKHQETEESE GPSEDVEEDS VGAKKAAPAR 480 AGTGSKRSRA AEVHNLSERR RRDRINEKMR ALQELIPNCN KVDKASMLDE AIEYLKTLQL 540 QVQIMSMGAG LYMPSMMLPP GMPHMHAGHM LPFSPMGAGM GMGIGMGFGM GMPDMIGGSS 600 GCSMVQVPPM HGAHFPGPPM LGPSALHGMG GSNLPIFGLS TQGYPMPYPC APLMPTSGGP 660 LLKTTMGLNA VGVAGPMDNL DSAPGSSSKD SIQNINSQAM QNCGANSSMN QTSSQCQVTN 720 ERFEQPALVQ NSGQASEVPD RGAVKSANGN DDAPNGATSD RLQLTCSFNP CH

Sequence ? help Back to Top

Protein Sequence Length: 772 aa Download sequence

MGQALKLKCL EGTNNGEVIE ICQPFTMPLS ELVYRLAKGK LDSSQEKNLT CSTDLSSGPE  60
NDFVELVWEN GQIQSSKTRK IQFSGSFASQ TSKIRDKDVG NGSNTKMGRF GAMDSVVGEV  120
PMSVPSVEMG LNQDDDMVPW LNYPIEDPLQ HDYCAEFLTE LSGVTVNEDS QTNYASMEKR  180
NCGNQSVRDP RAASVHNCLS LEQGHMTKVS SKGDVDANRP RTSSSQLNPS PSQQCQTSFP  240
YFRSIVSANN SENINNLSRH AASGDSIGVP PSGGGFPSVK VQKQVPMSSA TNSSLMNFSH  300
FSRPPALVKA NLHNIGTRAG SGVSSIERMA SKDKGSIASH SNPAESILVN PFSGLRKELS  360
SNCHPVTGSS KVDAKPLDPK PAEESLPAKQ PEALDQEDSK NDKNHCQLAE SATQGLVDGE  420
KTAEPLVASS SVCSGNSVER VSDEQTQNLK RKHQETEESE GPSEDVEEDS VGAKKAAPAR  480
AGTGSKRSRA AEVHNLSERR RRDRINEKMR ALQELIPNCN KVDKASMLDE AIEYLKTLQL  540
QVQIMSMGAG LYMPSMMLPP GMPHMHAGHM LPFSPMGAGM GMGIGMGFGM GMPDMIGGSS  600
GCSMVQVPPM HGAHFPGPPM LGPSALHGMG GSNLPIFGLS TQGYPMPYPC APLMPTSGGP  660
LLKTTMGLNA VGVAGPMDNL DSAPGSSSKD SIQNINSQAM QNCGANSSMN QTSSQCQVTN  720
ERFEQPALVQ NSGQASEVPD RGAVKSANGN DDAPNGATSD RLQLTCSFNP CH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	498	503	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	2e-52	bHLH family protein