PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638337.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 545aa MW: 60133.9 Da PI: 6.5691

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638337.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47	6.3e-15	168	227	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_021638337.1 168 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 227 57*****************666664477446***********************98 PP
2	AP2	47.1	5.9e-15	272	321	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_021638337.1 272 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 321 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MGSMNSNNWL SFPLSPTHSS LPTQLHASHP QQFSLGLVTE NLDNPFQTQE WSLVNTHGGS 60 EVPKVADFLG VSKSENQSDL VAFNEIQAND SDYIFPSNSL MPVQNTVVAA SSNYEFQENA 120 SNLQSLTLSM GSASGKGSTC ETSGDNSTNT VEAAAPRRTL DTFGQRTSIY RGVTRHRWTG 180 RYEAHLWDNS CRREGQSRKG RQVYLGGYDK EEKAARAYDL AALKYWGTST TTNFPISNYE 240 KELEDMKHMT RQEFVASIRR KSSGFSRGAS MYRGVTRHHQ HGRWQARIGR VAGNKDLYLG 300 TFSTEEEAAE AYDIAAIKFR GLNAVTNFDM SRYDVKSILE SNTLPIGGGA AKRLKEAQAI 360 ESSRKREEMI TLGSGFQYGS SSSSRPQAYP LMQAPFEQPQ QLLTLQNQDM SQYTQDASFH 420 QSYLQTQLHL HQQSATNYLQ QSSQNHQFYN SYIQNNPALF HGLFNMGSSS SIIENNASCN 480 GSYSGGYLGN GLGLASNSTG SNAVGSAEEL ALVKVDYDMT SGGYGNWSGD SVQGSNPGVF 540 TMWND

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MGSMNSNNWL SFPLSPTHSS LPTQLHASHP QQFSLGLVTE NLDNPFQTQE WSLVNTHGGS  60
EVPKVADFLG VSKSENQSDL VAFNEIQAND SDYIFPSNSL MPVQNTVVAA SSNYEFQENA  120
SNLQSLTLSM GSASGKGSTC ETSGDNSTNT VEAAAPRRTL DTFGQRTSIY RGVTRHRWTG  180
RYEAHLWDNS CRREGQSRKG RQVYLGGYDK EEKAARAYDL AALKYWGTST TTNFPISNYE  240
KELEDMKHMT RQEFVASIRR KSSGFSRGAS MYRGVTRHHQ HGRWQARIGR VAGNKDLYLG  300
TFSTEEEAAE AYDIAAIKFR GLNAVTNFDM SRYDVKSILE SNTLPIGGGA AKRLKEAQAI  360
ESSRKREEMI TLGSGFQYGS SSSSRPQAYP LMQAPFEQPQ QLLTLQNQDM SQYTQDASFH  420
QSYLQTQLHL HQQSATNYLQ QSSQNHQFYN SYIQNNPALF HGLFNMGSSS SIIENNASCN  480
GSYSGGYLGN GLGLASNSTG SNAVGSAEEL ALVKVDYDMT SGGYGNWSGD SVQGSNPGVF  540
TMWND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20840.1	0.0	AP2 family protein