PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638189.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CPP

Protein Properties

Length: 580aa MW: 63185.5 Da PI: 8.2316

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638189.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43	8.8e-14	116	155	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 + k+CnCk+s Clk+YCeCfaag +C+ C+C +C+N+ e+ XP_021638189.1 116 KIKHCNCKNSLCLKLYCECFAAGLHCNG-CSCLNCHNNVEN 155 679***********************.******9875 PP
2	TCR	50.8	3.2e-16	200	239	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cs++CkC dCkN+e XP_021638189.1 200 KHNKGCHCKKSGCLKKYCECFQANILCSNNCKCMDCKNSE 239 589***********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MGQSEATSDF APKKLARQLD FTTICRASAN LVFTPSQAQP QKVQPHPLLN LQLQTPPKQQ 60 SAMPQFHVLP QQVPVVRRIP HSVQKLPLPT LPPGMQESPG SVPRNDVEAK DCTPKKIKHC 120 NCKNSLCLKL YCECFAAGLH CNGCSCLNCH NNVENEGARQ KAVGATLERN PNAFRPKIAS 180 SPHGSLDGRE DARGAQMTGK HNKGCHCKKS GCLKKYCECF QANILCSNNC KCMDCKNSEG 240 SEERKSLFHG NHNSIGCIQQ TENADVTGAI GSSGYCTPIA SKKRKSKEIL GSVTKDQSAK 300 YQQESHVKNS AASSSPLSIP VSHSTTATVL GASKFRYKSP LSGILQPQDV KEICSLLVIL 360 SQEAKRELAG KMDRQPEVEN NHNFEPTSAS REDSGHDVHR TLPDDCVNGS KAGRERNNAS 420 GIDGIDMENG MPASPEIDLM CHEQEMVFME AGPPIRMGGL CQNKTRISSN KHECSEVYAE 480 QERLILTSFR DFLNRLITCG SIKETMYSPS AKAKMGNQQE PAEREDIYAG TEIGNHKKSY 540 SNGDAKSSIV ATSASNGVLP IMSAFPVKNS NTEINPESKS

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MGQSEATSDF APKKLARQLD FTTICRASAN LVFTPSQAQP QKVQPHPLLN LQLQTPPKQQ  60
SAMPQFHVLP QQVPVVRRIP HSVQKLPLPT LPPGMQESPG SVPRNDVEAK DCTPKKIKHC  120
NCKNSLCLKL YCECFAAGLH CNGCSCLNCH NNVENEGARQ KAVGATLERN PNAFRPKIAS  180
SPHGSLDGRE DARGAQMTGK HNKGCHCKKS GCLKKYCECF QANILCSNNC KCMDCKNSEG  240
SEERKSLFHG NHNSIGCIQQ TENADVTGAI GSSGYCTPIA SKKRKSKEIL GSVTKDQSAK  300
YQQESHVKNS AASSSPLSIP VSHSTTATVL GASKFRYKSP LSGILQPQDV KEICSLLVIL  360
SQEAKRELAG KMDRQPEVEN NHNFEPTSAS REDSGHDVHR TLPDDCVNGS KAGRERNNAS  420
GIDGIDMENG MPASPEIDLM CHEQEMVFME AGPPIRMGGL CQNKTRISSN KHECSEVYAE  480
QERLILTSFR DFLNRLITCG SIKETMYSPS AKAKMGNQQE PAEREDIYAG TEIGNHKKSY  540
SNGDAKSSIV ATSASNGVLP IMSAFPVKNS NTEINPESKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-122	CPP family protein