PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021638028.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 798aa MW: 88393 Da PI: 6.6415

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021638028.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.3	4.1e-09	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I r+++ + q++++++ + XP_021638028.1 52 AWTREEEESFFTALRQVGKN-FEKITRRVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MEMESQISLD SKVNSRIENT SIQHGDTGVT SLIPDHVEPQ LPAKKPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPGLCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LETQLLKDRK KNVRKRPSQV ENGPATVTNT 180 VTSQNRASAH ETRTVKLVLV DSQNLQRLGA GKGSLKRNVN IGVIRSNRGD SSAMKPARQR 240 RKQGIVMSAA YKKWEKAAIA GVSLVADAAE HLERTATDKE IEHDHSMAEH KSPDPIEKDL 300 PPLPAFAQNH YVESNTQTNM KLKLQLFPID DGTRRALEMD KHNPHLELTL SARKKISSVL 360 EHLNRKWGNS SIASGELMLF PYSAHRENFV GYQRWTQDTI VSAADVHTSI GSPPVFRLRY 420 GWFSNIELAS GTLQAPSASS YIPGGNTVDA ENEKIKIVDS VSTSGLSTND KSEKNIGLCE 480 DHLSTGNKSH ASVPLATNMP NDPSGHIATG PRNNVVGSSD SARVSWHEKE TGDRTIMKQL 540 DDADDMRLSS GTALSAGEWA DSLTNISVGD LLSEVPHDVD PNCIEPPVAQ SGQCLQQIPF 600 SCDSFDAAIA AHISRHENKM IFPSTVASLS SSIWDAEETC DAFSFQKNHA LYQEVPTSID 660 VVSPGTDKRT NSMFYGAFLE GLANGEGHVD YPTETDPMDE CSPDPHVVDN SVKDFTGLTD 720 IYWPESLGPL DLDIPSSKYH SEEFILGDSL SGLNRLIASS LDAFQNCSFF GLDKKDSMPV 780 VEARESSSFS DFKIGSGV

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MEMESQISLD SKVNSRIENT SIQHGDTGVT SLIPDHVEPQ LPAKKPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LETQLLKDRK KNVRKRPSQV ENGPATVTNT  180
VTSQNRASAH ETRTVKLVLV DSQNLQRLGA GKGSLKRNVN IGVIRSNRGD SSAMKPARQR  240
RKQGIVMSAA YKKWEKAAIA GVSLVADAAE HLERTATDKE IEHDHSMAEH KSPDPIEKDL  300
PPLPAFAQNH YVESNTQTNM KLKLQLFPID DGTRRALEMD KHNPHLELTL SARKKISSVL  360
EHLNRKWGNS SIASGELMLF PYSAHRENFV GYQRWTQDTI VSAADVHTSI GSPPVFRLRY  420
GWFSNIELAS GTLQAPSASS YIPGGNTVDA ENEKIKIVDS VSTSGLSTND KSEKNIGLCE  480
DHLSTGNKSH ASVPLATNMP NDPSGHIATG PRNNVVGSSD SARVSWHEKE TGDRTIMKQL  540
DDADDMRLSS GTALSAGEWA DSLTNISVGD LLSEVPHDVD PNCIEPPVAQ SGQCLQQIPF  600
SCDSFDAAIA AHISRHENKM IFPSTVASLS SSIWDAEETC DAFSFQKNHA LYQEVPTSID  660
VVSPGTDKRT NSMFYGAFLE GLANGEGHVD YPTETDPMDE CSPDPHVVDN SVKDFTGLTD  720
IYWPESLGPL DLDIPSSKYH SEEFILGDSL SGLNRLIASS LDAFQNCSFF GLDKKDSMPV  780
VEARESSSFS DFKIGSGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	0.0	MYB_related family protein