PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637682.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 518aa MW: 57422.8 Da PI: 7.3687

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637682.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.3	7e-17	163	212	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_021637682.1 163 SQYRGVTYYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 212 78*****************......55**********************997 PP
2	AP2	43.8	6.6e-14	255	305	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_021637682.1 255 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 305 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MWDLNDSPDQ RRGDESEGCS SQKTSLDGDD EKGKRVGSVS NSSSSAVVIE DGSEEEDVSG 60 EGCRIKKRSS KIFGFSVTHD NSMESDPPVT RQFFPVEDQE MGATSGGSGG GGGGGGGGGG 120 AGFPRAHWVG VKFCQSESLA SPKSVEVSQP LKKSRRGPRS RSSQYRGVTY YRRTGRWESH 180 IWDCGKQVYL GGFDTAHAAA RAYDRAAIKF RGVEADINFN IEDYEDDLKQ MSNLTKEEFV 240 HVLRRQSTGF PRGSSKYRGV TLHKCGRWEA RMGQFLGKKY VYLGLFDTEI EAARAYDKAA 300 IKCNGKEAVT NFDPSIYENE LNSSESSGSA ADHNLDLSLG NSGSKQNNVG FSNDRQNAGI 360 DQQSAQMPFE ADWRNRGIRP KLNLYRNSDS NEHRREGYCE TETMQLLSQT HIQSPGNEPQ 420 RYGQFRRPGE TQMFHDFSPT NYQIQFPSSS NGGRIGSDLS LSPSDYDHHQ QRQWQSRPPP 480 PPYQLVANAA ASSGFPQQIR TPQSWLQKNG LHSILRTP

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MWDLNDSPDQ RRGDESEGCS SQKTSLDGDD EKGKRVGSVS NSSSSAVVIE DGSEEEDVSG  60
EGCRIKKRSS KIFGFSVTHD NSMESDPPVT RQFFPVEDQE MGATSGGSGG GGGGGGGGGG  120
AGFPRAHWVG VKFCQSESLA SPKSVEVSQP LKKSRRGPRS RSSQYRGVTY YRRTGRWESH  180
IWDCGKQVYL GGFDTAHAAA RAYDRAAIKF RGVEADINFN IEDYEDDLKQ MSNLTKEEFV  240
HVLRRQSTGF PRGSSKYRGV TLHKCGRWEA RMGQFLGKKY VYLGLFDTEI EAARAYDKAA  300
IKCNGKEAVT NFDPSIYENE LNSSESSGSA ADHNLDLSLG NSGSKQNNVG FSNDRQNAGI  360
DQQSAQMPFE ADWRNRGIRP KLNLYRNSDS NEHRREGYCE TETMQLLSQT HIQSPGNEPQ  420
RYGQFRRPGE TQMFHDFSPT NYQIQFPSSS NGGRIGSDLS LSPSDYDHHQ QRQWQSRPPP  480
PPYQLVANAA ASSGFPQQIR TPQSWLQKNG LHSILRTP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-101	AP2 family protein