PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021637557.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 252aa MW: 28063.8 Da PI: 8.2115 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 113.2 | 1.7e-35 | 11 | 110 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlkael 94 aCaaCk+lr++Ca+dC+lap+fp++++++f n+hklFG+sn+lk+lk+l++ + +++a++s++y+A+arardP G++++i++l+ q+e + +l XP_021637557.1 11 ACAACKYLRKRCAADCPLAPHFPSNHSSDFLNAHKLFGVSNILKTLKKLHTFDeKKNAVKSMIYQANARARDPAGGCYRIITRLEDQIEIYQLQL 105 7************************************************665449*************************************999 PP DUF260 95 allke 99 ++++ XP_021637557.1 106 TRARQ 110 98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MTASASAGSQ ACAACKYLRK RCAADCPLAP HFPSNHSSDF LNAHKLFGVS NILKTLKKLH 60 TFDEKKNAVK SMIYQANARA RDPAGGCYRI ITRLEDQIEI YQLQLTRARQ LIAFYQRLAS 120 HRLQVSPLNM YGTTTSTLQS ILCGQQQQEE SSFVNENYQT DGTIVKIDME KLAPSCLDGN 180 DSQPASSGKP LFAMDRSEDI KPLLGEFDVG DYIVGQCSDK LVIKEEHKPI HHGQGHNLKD 240 VSYFSFKNGK ET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13850.1 | 9e-27 | LBD family protein |