PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021637323.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 387aa    MW: 42599.7 Da    PI: 7.426
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021637323.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.42.5e-08137157526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G Ck Gd C FaHg
  XP_021637323.1 137 ACPDFRK-GSCKKGDACEFAHG 157
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MMLGERHRPN PSVHVPPWAL LDDTNPEAYP SSPMGSHSGN AATASDYNPY NIQEVVAALQ  60
CYLPSNEPDL DPDYELSGLE PDSPVDAYSC DHFRMFEFKV RRCARGRSHD WTECPYAHPG  120
EKARRRDPRK YHYSGTACPD FRKGSCKKGD ACEFAHGVFE CWLHPARYRT QPCKDGPNCR  180
RRVCFFAHTA EQLRVLPQQS PRSVNSIDSY DGSPLRQAIE ASCGKSLPFL ASPGSISPPA  240
TPPVDSPPMS PMTQSLSRSL GSNSINEMVA SLRNLQLGKG KSLPSSWNVQ VGGSGFGSPR  300
GSMIRPVFCS LPSTPTGGPT RSGLGHRDIW ENDCEEEPAM ERVESGRDLR AKMFEKLKKE  360
NSLGRVGPYA GQSTNGPDVG WVSELLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-144C3H family protein