PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021637256.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 381aa MW: 43813.1 Da PI: 4.6213

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021637256.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.8	4.8e-35	15	107	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Flkk y++++de+++++isws+n++sf+++d++ef+ ++LpkyFkhsn +SF+RQLn+YgF+k+++++ weF+++ F +++k+ll++ XP_021637256.1 15 FLKKCYDMVDDESTNSIISWSQNNDSFIIWDMTEFSIQLLPKYFKHSNSSSFIRQLNIYGFRKIDTDR---------WEFANDGFIRNQKQLLKN 100 9**************************************************************999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i r+k++ XP_021637256.1 101 ISRRKHS 107 **987 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MVKSGDSGSL SVAPFLKKCY DMVDDESTNS IISWSQNNDS FIIWDMTEFS IQLLPKYFKH 60 SNSSSFIRQL NIYGFRKIDT DRWEFANDGF IRNQKQLLKN ISRRKHSQFT VNQKELQQQD 120 SSVEPFGKTE NEGLWKKIEN LKTDKNALMQ ELINLRQHQE NADNNLLLLR DKVQGMEKNQ 180 QQMLSFLVMV MQSPGFLVQL LHPKENNWRM AEPGSIVEQG ADEEQLASDG MIIRYQPPQM 240 NEMPTPMVSE KPEESNTFSD GKDSFLSPDF MKLLMDENSS LFENHAPFIP PELYDDGAWE 300 KLFLASPFLQ NVDDTKQDTE RTTDTENEIG TAVHGTQVEQ MVRSGSSGFL TEEIDKSKSL 360 EYKSLAHGPH SEKSENLEIR T

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MVKSGDSGSL SVAPFLKKCY DMVDDESTNS IISWSQNNDS FIIWDMTEFS IQLLPKYFKH  60
SNSSSFIRQL NIYGFRKIDT DRWEFANDGF IRNQKQLLKN ISRRKHSQFT VNQKELQQQD  120
SSVEPFGKTE NEGLWKKIEN LKTDKNALMQ ELINLRQHQE NADNNLLLLR DKVQGMEKNQ  180
QQMLSFLVMV MQSPGFLVQL LHPKENNWRM AEPGSIVEQG ADEEQLASDG MIIRYQPPQM  240
NEMPTPMVSE KPEESNTFSD GKDSFLSPDF MKLLMDENSS LFENHAPFIP PELYDDGAWE  300
KLFLASPFLQ NVDDTKQDTE RTTDTENEIG TAVHGTQVEQ MVRSGSSGFL TEEIDKSKSL  360
EYKSLAHGPH SEKSENLEIR T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67970.1	1e-107	HSF family protein