PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021637149.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | GATA | ||||||||
Protein Properties | Length: 143aa MW: 15614.7 Da PI: 10.5528 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 58.4 | 9.3e-19 | 30 | 63 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk+ XP_021637149.1 30 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKK 63 ********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MLDPSEKGSE PEDMSSKSSE GGEHQQKKTC ADCGTSKTPL WRGGPAGPKS LCNACGIRSR 60 KKKRDNLGLN RAANEKKARK GNNHRSSSNN SNRLGDGLKQ RLLALGREVL MQRSTVEKQR 120 RKLGEEEQAA VLLMALSYGS VYA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 61 | 80 | KKKRDNLGLNRAANEKKARK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 5e-51 | GATA family protein |