PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021637028.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 212aa MW: 24704.2 Da PI: 8.7767 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.9 | 6.5e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr+g+lKKA+ELSvLCdaevav+ifs++g+l e+ss XP_021637028.1 9 KRIENATSRQVTFSKRRKGLLKKAYELSVLCDAEVAVLIFSQKGRLCEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 63 | 1.1e-21 | 82 | 172 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +e+ ++l e++ k+ie+L+ +qR++lG+dL s sl+eLq++ +qLeks++kiR++K+el++eqie+l+ ke+ l +en + r+k XP_021637028.1 82 DTEQYIQHLVSESTEKVKKIEQLEISQRKILGQDLASSSLEELQEMHSQLEKSISKIRARKDELFKEQIEKLKAKERLLLDENASYREKCS 172 5677789999999999999*****************************************************************9999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MVRGKIEMKR IENATSRQVT FSKRRKGLLK KAYELSVLCD AEVAVLIFSQ KGRLCEFSSN 60 DMQKTIERYG KHAKEVQDDR VDTEQYIQHL VSESTEKVKK IEQLEISQRK ILGQDLASSS 120 LEELQEMHSQ LEKSISKIRA RKDELFKEQI EKLKAKERLL LDENASYREK CSEKPWPHPT 180 QQKEVDRYLS LSGKNSEVET QLSIGLPEPE RH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.3 | 1e-79 | MIKC_MADS family protein |