PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021636999.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 221aa    MW: 24312.2 Da    PI: 8.1804
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021636999.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260145.41.6e-4581071100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l++++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+ +l+
  XP_021636999.1   8 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLS 102
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                      +k+e
  XP_021636999.1 103 CAKSE 107
                     99987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MASSSNSPCA ACKFLRRKCQ PECVFAPYFP PDQPQKFANV HKVFGASNVT KLLNELHPSQ  60
REDAVNSLAY EADMRLRDPV YGCVGVISLL QHQLRQLQMD LSCAKSELSK YQNLGITGHA  120
GLFAAAAAAA TATTHNHNHH HHHPQNIGIN LIGAGGGGRD HHYHHQFFPR DQQQMMRSFD  180
TANNYDASLL AMNVSASIGQ LSQFQQPRAA AGDDRRTIDP S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65620.31e-91LBD family protein