PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021636999.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 221aa MW: 24312.2 Da PI: 8.1804 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 145.4 | 1.6e-45 | 8 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l++++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+ +l+ XP_021636999.1 8 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLS 102 7********************************************************************************************** PP DUF260 96 llkee 100 +k+e XP_021636999.1 103 CAKSE 107 99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MASSSNSPCA ACKFLRRKCQ PECVFAPYFP PDQPQKFANV HKVFGASNVT KLLNELHPSQ 60 REDAVNSLAY EADMRLRDPV YGCVGVISLL QHQLRQLQMD LSCAKSELSK YQNLGITGHA 120 GLFAAAAAAA TATTHNHNHH HHHPQNIGIN LIGAGGGGRD HHYHHQFFPR DQQQMMRSFD 180 TANNYDASLL AMNVSASIGQ LSQFQQPRAA AGDDRRTIDP S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65620.3 | 1e-91 | LBD family protein |