PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021636783.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 357aa MW: 41036.2 Da PI: 5.0392

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021636783.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.6	2.6e-35	41	132	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y+i+ed ++++++sws+ +nsfvv+d+++fa ++Lp+yFkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F +++k+ll++ XP_021636783.1 41 FLTKTYDIVEDMATNHIVSWSRGNNSFVVWDPQTFAMSLLPRYFKHNNFSSFVRQLNTYGFRKLDPDR---------WEFANEGFLREQKHLLKN 126 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+++ XP_021636783.1 127 IRRRRT 132 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MNRLGRVKDE YAGASSSYSG MASTAIPQPI EGLHDAGPPP FLTKTYDIVE DMATNHIVSW 60 SRGNNSFVVW DPQTFAMSLL PRYFKHNNFS SFVRQLNTYG FRKLDPDRWE FANEGFLREQ 120 KHLLKNIRRR RTPQPQACQQ SLDPCVEVGR FGLDAEVDLL RRDKQVLMME LVKLRQHQQN 180 TKACLQLMEH RLKRTETKQQ QVMGFLARAI QNPNFVQQLV QLKDRRKELE EAISKKRRRP 240 IDQGPSNVQV ENFDHGGGVE TFVKIERQEF GDLSEFDVSE LDALAMTMQG VTGSQQNLEE 300 ECMERGEEHV DKGKDLDEGF WDELLNEDIG EEMGRGDEAE EIDVLVEQLG YLGSSPK

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MNRLGRVKDE YAGASSSYSG MASTAIPQPI EGLHDAGPPP FLTKTYDIVE DMATNHIVSW  60
SRGNNSFVVW DPQTFAMSLL PRYFKHNNFS SFVRQLNTYG FRKLDPDRWE FANEGFLREQ  120
KHLLKNIRRR RTPQPQACQQ SLDPCVEVGR FGLDAEVDLL RRDKQVLMME LVKLRQHQQN  180
TKACLQLMEH RLKRTETKQQ QVMGFLARAI QNPNFVQQLV QLKDRRKELE EAISKKRRRP  240
IDQGPSNVQV ENFDHGGGVE TFVKIERQEF GDLSEFDVSE LDALAMTMQG VTGSQQNLEE  300
ECMERGEEHV DKGKDLDEGF WDELLNEDIG EEMGRGDEAE EIDVLVEQLG YLGSSPK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	131	REQKHLLKNIRRRR
2	225	239	RRKELEEAISKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-141	HSF family protein