PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021636397.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 376aa MW: 42832.8 Da PI: 4.5422

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021636397.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	116.7	1.4e-36	44	135	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye++ed+++++++sws+ nsf+v+d+++f++++LpkyFkh+nf+SF+RQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ XP_021636397.1 44 FLNKTYEMVEDPSTDSVVSWSRARNSFIVWDSHNFSTTLLPKYFKHNNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKT 129 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 ikr+++ XP_021636397.1 130 IKRRRH 135 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MEGVVVKEEK ETVTCAGGFS SSSSSSSFQP QPMEGLHEVG PPPFLNKTYE MVEDPSTDSV 60 VSWSRARNSF IVWDSHNFST TLLPKYFKHN NFSSFIRQLN TYGFRKVDPD RWEFANEGFL 120 RGQKHLLKTI KRRRHVSQSM QQQSEGPCVE VGEFGLEGEL ERLKRDRSVL MAEIVRLRHQ 180 QQQSREQIAA MEDRLQSTER KQQQMMTFLA KALNNPSFVQ QLSRRSMQRR ELRGVEIGRK 240 RRLMASPSLE NLQEEAASMA IGVGQVVDYT NQELGTIETE IDTLFSLDNE SSSDVGDPIA 300 CSTQGTGVDN WGSVSETIWE ELLNDDVIAG NPNEEVIPDD ELEFDVEVED LVAKPEDWGE 360 ELRDLVDQMV YLRSKP

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MEGVVVKEEK ETVTCAGGFS SSSSSSSFQP QPMEGLHEVG PPPFLNKTYE MVEDPSTDSV  60
VSWSRARNSF IVWDSHNFST TLLPKYFKHN NFSSFIRQLN TYGFRKVDPD RWEFANEGFL  120
RGQKHLLKTI KRRRHVSQSM QQQSEGPCVE VGEFGLEGEL ERLKRDRSVL MAEIVRLRHQ  180
QQQSREQIAA MEDRLQSTER KQQQMMTFLA KALNNPSFVQ QLSRRSMQRR ELRGVEIGRK  240
RRLMASPSLE NLQEEAASMA IGVGQVVDYT NQELGTIETE IDTLFSLDNE SSSDVGDPIA  300
CSTQGTGVDN WGSVSETIWE ELLNDDVIAG NPNEEVIPDD ELEFDVEVED LVAKPEDWGE  360
ELRDLVDQMV YLRSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	133	LKTIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-111	HSF family protein