PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021635914.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARF

Protein Properties

Length: 698aa MW: 77583.5 Da PI: 6.5935

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021635914.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.4	2.8e-23	128	228	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 f+k+lt sd++++g +++ +k+a+e+ +++ + +++l +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF + +++ XP_021635914.1 128 FCKILTASDTSTHGGFSVLRKHATEClpaldMNQATPTQELAAKDLHGYEWRFKHIFRGQPKRHLLTTGWSTFVTSKRLVAGDAFVFL--RGDDG 220 99**************************9555556679********************************************..34899 PP ..EEEEE- CS B3 91 elvvkvfr 98 el+v+v+r XP_021635914.1 221 ELRVGVRR 228 99**98 PP
2	Auxin_resp	100.7	2e-33	254	333	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F v+Y+Pr+ s+F++ ++k+++a+++ +svGmR+km+fe+ed +err++Gt+vgv d++p +W++SkWrsLk XP_021635914.1 254 ASHAVTTQTLFVVYYKPRT--SQFIIGLNKYLEAVNHGFSVGMRYKMRFEGEDTPERRFTGTIVGVGDISP-QWTGSKWRSLK 333 689*************6..9*******************************************99.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
MAHVETNFGA ASISHDERGG DDLYKELWKA CAGPLVDVPV PGERVFYFPQ GHMEQLEAST 60 NQELTQQIPR FNLPSKILCR VVNIQLLAEQ ETDEVYAQIT LHPEPNQAEP TSPDSCSPEP 120 QTPTVHSFCK ILTASDTSTH GGFSVLRKHA TECLPALDMN QATPTQELAA KDLHGYEWRF 180 KHIFRGQPKR HLLTTGWSTF VTSKRLVAGD AFVFLRGDDG ELRVGVRRLA RQQSPMPSSV 240 ISRQSMHLGV LATASHAVTT QTLFVVYYKP RTSQFIIGLN KYLEAVNHGF SVGMRYKMRF 300 EGEDTPERRF TGTIVGVGDI SPQWTGSKWR SLKIQWDEPA TIQRPERVSP WDIEPFAASA 360 SINPPPTVVK SKRPRPVGTP MSEITTNSTT SPFWYHGSTH SHDLSQLGSA AEAQSCVSQV 420 VWSMRQKEID SSILNGSSCC NSRVRPEGIW PPSPHMNVSL SLFPDSADDN RKITQSFVSG 480 YSSSVPLRQS DGLMHDQVEK GKKYENSVGC RLFGIDLTNN YSAAGSPEEA LCTTVDPNGT 540 RRPVAAPDDF DKAQNMDVSK SSKQQKQIAS DALPRETHGK LGTTSTRTRT KVQMQGVAVG 600 RAVDLTVLKG YGDLVKELEE MFEIKGELFT QEKWAVVFTD DEGDMMLVGD DPWLEFCKMV 660 KKILIYSSEE VKKMSTRYKF LASSLEDEGT IASLDSQH

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

MAHVETNFGA ASISHDERGG DDLYKELWKA CAGPLVDVPV PGERVFYFPQ GHMEQLEAST  60
NQELTQQIPR FNLPSKILCR VVNIQLLAEQ ETDEVYAQIT LHPEPNQAEP TSPDSCSPEP  120
QTPTVHSFCK ILTASDTSTH GGFSVLRKHA TECLPALDMN QATPTQELAA KDLHGYEWRF  180
KHIFRGQPKR HLLTTGWSTF VTSKRLVAGD AFVFLRGDDG ELRVGVRRLA RQQSPMPSSV  240
ISRQSMHLGV LATASHAVTT QTLFVVYYKP RTSQFIIGLN KYLEAVNHGF SVGMRYKMRF  300
EGEDTPERRF TGTIVGVGDI SPQWTGSKWR SLKIQWDEPA TIQRPERVSP WDIEPFAASA  360
SINPPPTVVK SKRPRPVGTP MSEITTNSTT SPFWYHGSTH SHDLSQLGSA AEAQSCVSQV  420
VWSMRQKEID SSILNGSSCC NSRVRPEGIW PPSPHMNVSL SLFPDSADDN RKITQSFVSG  480
YSSSVPLRQS DGLMHDQVEK GKKYENSVGC RLFGIDLTNN YSAAGSPEEA LCTTVDPNGT  540
RRPVAAPDDF DKAQNMDVSK SSKQQKQIAS DALPRETHGK LGTTSTRTRT KVQMQGVAVG  600
RAVDLTVLKG YGDLVKELEE MFEIKGELFT QEKWAVVFTD DEGDMMLVGD DPWLEFCKMV  660
KKILIYSSEE VKKMSTRYKF LASSLEDEGT IASLDSQH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	372	376	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein