PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021635859.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 211aa MW: 23593.8 Da PI: 8.4879 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 125 | 3.6e-39 | 11 | 112 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC++dC++apyf +eq p +fa++hk+FGasnv+kll ++p +r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+++l+a+l XP_021635859.1 11 PCGACKFLRRKCVSDCIFAPYFRSEQgPDRFAAIHKVFGASNVSKLLLHVPIADRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVACLQAQL 105 7***********************9999******************************************************************* PP DUF260 95 allkeel 101 ++k++l XP_021635859.1 106 MQVKAQL 112 *999875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MASSGSSSRS PCGACKFLRR KCVSDCIFAP YFRSEQGPDR FAAIHKVFGA SNVSKLLLHV 60 PIADRCEAVV TIAYEAQARI RDPVYGCVAH IFALQQQVAC LQAQLMQVKA QLAQNLVDSS 120 RNRENQWQGN NNYGVPSSFP GNHPAYNCMM NPISPQISLE SVDHNNDGFI SMQDIIQSSR 180 EDFAFQSCTK RRPYNPDLGE LQTLKLRMMR N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42430.1 | 7e-61 | LBD family protein |