PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021635653.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | SBP | ||||||||
Protein Properties | Length: 709aa MW: 79877.8 Da PI: 7.0878 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 114.4 | 6.2e-36 | 126 | 203 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++Cead+ e+k yh+rh+vC +++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k++ XP_021635653.1 126 RCQVPECEADIGELKGYHKRHRVCLRCANASAVVLDGENKRYCQQCGKFHLLSDFDEGKRSCRRKLERHNNRRRRKSH 203 6*************************************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 709 aa Download sequence |
MGPSPPPSPG ALRPKFHDME IHPPVSEDPS SSALWDWGDL LDFTVDDQFP ISFDSVGTST 60 TIEVNQIETA PVPDRVRKRD PRLTCSNFLA GRVPCACPEL DEKLEEEAVP GKKRVRTTRS 120 SVGVARCQVP ECEADIGELK GYHKRHRVCL RCANASAVVL DGENKRYCQQ CGKFHLLSDF 180 DEGKRSCRRK LERHNNRRRR KSHDSKGAVD KEPQGELLRE DTACDGEAGK DCKIVEKEAL 240 IESEDGRISF KLYDWNPAEF PRRLRHQIFE WLASMPVELE GYIRPGCTIL TAFLSMPTVM 300 WAKLLEDPVS YVHDFVITPG KMLSKRSPML VYLNNMIFHV MKDGNSVMKV NLEGQAPRLH 360 YVHPTCFEAG KPIEFVACGS NLLQPKFRLL VSFAGKYLAY DYCVALPHGP TEGCSGLGHQ 420 LCKIFIPNVE PNVFGPAFIE IENESGLSNF IPVLIGNEEI CSEMEIIQHR LDSSQLSSGS 480 QCEVSARRQM AFSELVVDIA WLLKKPSTES LQQIMSSSQI QRLNSLLNFL LHHESTAILA 540 KILQNLKIIV DEMEKTRVMY GISDFEMSLL QKYMDGASDI LHQKVKQSDN VDERDFRRCS 600 ETDMPSVAPF TNEDLEKNSN EKLRVMANSS ASDRTPLLSK EVVVNVNLGK ERPKRSCSLV 660 FSNRVMKFRP AVFLIATFAV CLGVCAILLH PNQVNKFAVS IRRCLTDRL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 188 | 200 | RRKLERHNNRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18830.1 | 0.0 | SBP family protein |