PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021635653.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family SBP
Protein Properties Length: 709aa    MW: 79877.8 Da    PI: 7.0878
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021635653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP114.46.2e-36126203178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cqv++Cead+ e+k yh+rh+vC  +++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k++
  XP_021635653.1 126 RCQVPECEADIGELKGYHKRHRVCLRCANASAVVLDGENKRYCQQCGKFHLLSDFDEGKRSCRRKLERHNNRRRRKSH 203
                     6*************************************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 709 aa     Download sequence    
MGPSPPPSPG ALRPKFHDME IHPPVSEDPS SSALWDWGDL LDFTVDDQFP ISFDSVGTST  60
TIEVNQIETA PVPDRVRKRD PRLTCSNFLA GRVPCACPEL DEKLEEEAVP GKKRVRTTRS  120
SVGVARCQVP ECEADIGELK GYHKRHRVCL RCANASAVVL DGENKRYCQQ CGKFHLLSDF  180
DEGKRSCRRK LERHNNRRRR KSHDSKGAVD KEPQGELLRE DTACDGEAGK DCKIVEKEAL  240
IESEDGRISF KLYDWNPAEF PRRLRHQIFE WLASMPVELE GYIRPGCTIL TAFLSMPTVM  300
WAKLLEDPVS YVHDFVITPG KMLSKRSPML VYLNNMIFHV MKDGNSVMKV NLEGQAPRLH  360
YVHPTCFEAG KPIEFVACGS NLLQPKFRLL VSFAGKYLAY DYCVALPHGP TEGCSGLGHQ  420
LCKIFIPNVE PNVFGPAFIE IENESGLSNF IPVLIGNEEI CSEMEIIQHR LDSSQLSSGS  480
QCEVSARRQM AFSELVVDIA WLLKKPSTES LQQIMSSSQI QRLNSLLNFL LHHESTAILA  540
KILQNLKIIV DEMEKTRVMY GISDFEMSLL QKYMDGASDI LHQKVKQSDN VDERDFRRCS  600
ETDMPSVAPF TNEDLEKNSN EKLRVMANSS ASDRTPLLSK EVVVNVNLGK ERPKRSCSLV  660
FSNRVMKFRP AVFLIATFAV CLGVCAILLH PNQVNKFAVS IRRCLTDRL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1188200RRKLERHNNRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18830.10.0SBP family protein