PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021635652.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 761aa MW: 85072.3 Da PI: 6.8524

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021635652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	114.3	6.9e-36	126	203	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++Cead+ e+k yh+rh+vC +++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k++ XP_021635652.1 126 RCQVPECEADIGELKGYHKRHRVCLRCANASAVVLDGENKRYCQQCGKFHLLSDFDEGKRSCRRKLERHNNRRRRKSH 203 6*************************************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 761 aa Download sequence
MGPSPPPSPG ALRPKFHDME IHPPVSEDPS SSALWDWGDL LDFTVDDQFP ISFDSVGTST 60 TIEVNQIETA PVPDRVRKRD PRLTCSNFLA GRVPCACPEL DEKLEEEAVP GKKRVRTTRS 120 SVGVARCQVP ECEADIGELK GYHKRHRVCL RCANASAVVL DGENKRYCQQ CGKFHLLSDF 180 DEGKRSCRRK LERHNNRRRR KSHDSKGAVD KEPQGELLRE DTACDGEAGK DCKIVEKEAL 240 IESEDGNVSS LHSGPNSQNL NSDSGLSVGT PKDGVKDDSK FSHSPFNCDN KSFYSSVAGY 300 RSSFMIGILQ NSLEGFDTKY FKEFLHMPVE LEGYIRPGCT ILTAFLSMPT VMWAKLLEDP 360 VSYVHDFVIT PGKMLSKRSP MLVYLNNMIF HVMKDGNSVM KVNLEGQAPR LHYVHPTCFE 420 AGKPIEFVAC GSNLLQPKFR LLVSFAGKYL AYDYCVALPH GPTEGCSGLG HQLCKIFIPN 480 VEPNVFGPAF IEIENESGLS NFIPVLIGNE EICSEMEIIQ HRLDSSQLSS GSQCEVSARR 540 QMAFSELVVD IAWLLKKPST ESLQQIMSSS QIQRLNSLLN FLLHHESTAI LAKILQNLKI 600 IVDEMEKTRV MYGISDFEMS LLQKYMDGAS DILHQKVKQS DNVDERDFRR CSETDMPSVA 660 PFTNEDLEKN SNEKLRVMAN SSASDRTPLL SKEVVVNVNL GKERPKRSCS LVFSNRVMKF 720 RPAVFLIATF AVCLGVCAIL LHPNQVNKFA VSIRRCLTDR L

Sequence ? help Back to Top

Protein Sequence Length: 761 aa Download sequence

MGPSPPPSPG ALRPKFHDME IHPPVSEDPS SSALWDWGDL LDFTVDDQFP ISFDSVGTST  60
TIEVNQIETA PVPDRVRKRD PRLTCSNFLA GRVPCACPEL DEKLEEEAVP GKKRVRTTRS  120
SVGVARCQVP ECEADIGELK GYHKRHRVCL RCANASAVVL DGENKRYCQQ CGKFHLLSDF  180
DEGKRSCRRK LERHNNRRRR KSHDSKGAVD KEPQGELLRE DTACDGEAGK DCKIVEKEAL  240
IESEDGNVSS LHSGPNSQNL NSDSGLSVGT PKDGVKDDSK FSHSPFNCDN KSFYSSVAGY  300
RSSFMIGILQ NSLEGFDTKY FKEFLHMPVE LEGYIRPGCT ILTAFLSMPT VMWAKLLEDP  360
VSYVHDFVIT PGKMLSKRSP MLVYLNNMIF HVMKDGNSVM KVNLEGQAPR LHYVHPTCFE  420
AGKPIEFVAC GSNLLQPKFR LLVSFAGKYL AYDYCVALPH GPTEGCSGLG HQLCKIFIPN  480
VEPNVFGPAF IEIENESGLS NFIPVLIGNE EICSEMEIIQ HRLDSSQLSS GSQCEVSARR  540
QMAFSELVVD IAWLLKKPST ESLQQIMSSS QIQRLNSLLN FLLHHESTAI LAKILQNLKI  600
IVDEMEKTRV MYGISDFEMS LLQKYMDGAS DILHQKVKQS DNVDERDFRR CSETDMPSVA  660
PFTNEDLEKN SNEKLRVMAN SSASDRTPLL SKEVVVNVNL GKERPKRSCS LVFSNRVMKF  720
RPAVFLIATF AVCLGVCAIL LHPNQVNKFA VSIRRCLTDR L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	188	200	RRKLERHNNRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.1	0.0	SBP family protein