PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021635647.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | SBP | ||||||||
Protein Properties | Length: 764aa MW: 85607.9 Da PI: 7.0255 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 114.3 | 6.9e-36 | 126 | 203 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++Cead+ e+k yh+rh+vC +++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k++ XP_021635647.1 126 RCQVPECEADIGELKGYHKRHRVCLRCANASAVVLDGENKRYCQQCGKFHLLSDFDEGKRSCRRKLERHNNRRRRKSH 203 6*************************************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 764 aa Download sequence |
MGPSPPPSPG ALRPKFHDME IHPPVSEDPS SSALWDWGDL LDFTVDDQFP ISFDSVGTST 60 TIEVNQIETA PVPDRVRKRD PRLTCSNFLA GRVPCACPEL DEKLEEEAVP GKKRVRTTRS 120 SVGVARCQVP ECEADIGELK GYHKRHRVCL RCANASAVVL DGENKRYCQQ CGKFHLLSDF 180 DEGKRSCRRK LERHNNRRRR KSHDSKGAVD KEPQGELLRE DTACDGEAGK DCKIVEKEAL 240 IESEDGNVSS LHSGPNSQNL NSDSGLSVGT PKDGVKDDSK FSHSPFNCDN KSFYSSVCPT 300 GRISFKLYDW NPAEFPRRLR HQIFEWLASM PVELEGYIRP GCTILTAFLS MPTVMWAKLL 360 EDPVSYVHDF VITPGKMLSK RSPMLVYLNN MIFHVMKDGN SVMKVNLEGQ APRLHYVHPT 420 CFEAGKPIEF VACGSNLLQP KFRLLVSFAG KYLAYDYCVA LPHGPTEGCS GLGHQLCKIF 480 IPNVEPNVFG PAFIEIENES GLSNFIPVLI GNEEICSEME IIQHRLDSSQ LSSGSQCEVS 540 ARRQMAFSEL VVDIAWLLKK PSTESLQQIM SSSQIQRLNS LLNFLLHHES TAILAKILQN 600 LKIIVDEMEK TRVMYGISDF EMSLLQKYMD GASDILHQKV KQSDNVDERD FRRCSETDMP 660 SVAPFTNEDL EKNSNEKLRV MANSSASDRT PLLSKEVVVN VNLGKERPKR SCSLVFSNRV 720 MKFRPAVFLI ATFAVCLGVC AILLHPNQVN KFAVSIRRCL TDRL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 188 | 200 | RRKLERHNNRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18830.1 | 0.0 | SBP family protein |