PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021635647.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family SBP
Protein Properties Length: 764aa    MW: 85607.9 Da    PI: 7.0255
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021635647.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP114.36.9e-36126203178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cqv++Cead+ e+k yh+rh+vC  +++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k++
  XP_021635647.1 126 RCQVPECEADIGELKGYHKRHRVCLRCANASAVVLDGENKRYCQQCGKFHLLSDFDEGKRSCRRKLERHNNRRRRKSH 203
                     6*************************************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 764 aa     Download sequence    
MGPSPPPSPG ALRPKFHDME IHPPVSEDPS SSALWDWGDL LDFTVDDQFP ISFDSVGTST  60
TIEVNQIETA PVPDRVRKRD PRLTCSNFLA GRVPCACPEL DEKLEEEAVP GKKRVRTTRS  120
SVGVARCQVP ECEADIGELK GYHKRHRVCL RCANASAVVL DGENKRYCQQ CGKFHLLSDF  180
DEGKRSCRRK LERHNNRRRR KSHDSKGAVD KEPQGELLRE DTACDGEAGK DCKIVEKEAL  240
IESEDGNVSS LHSGPNSQNL NSDSGLSVGT PKDGVKDDSK FSHSPFNCDN KSFYSSVCPT  300
GRISFKLYDW NPAEFPRRLR HQIFEWLASM PVELEGYIRP GCTILTAFLS MPTVMWAKLL  360
EDPVSYVHDF VITPGKMLSK RSPMLVYLNN MIFHVMKDGN SVMKVNLEGQ APRLHYVHPT  420
CFEAGKPIEF VACGSNLLQP KFRLLVSFAG KYLAYDYCVA LPHGPTEGCS GLGHQLCKIF  480
IPNVEPNVFG PAFIEIENES GLSNFIPVLI GNEEICSEME IIQHRLDSSQ LSSGSQCEVS  540
ARRQMAFSEL VVDIAWLLKK PSTESLQQIM SSSQIQRLNS LLNFLLHHES TAILAKILQN  600
LKIIVDEMEK TRVMYGISDF EMSLLQKYMD GASDILHQKV KQSDNVDERD FRRCSETDMP  660
SVAPFTNEDL EKNSNEKLRV MANSSASDRT PLLSKEVVVN VNLGKERPKR SCSLVFSNRV  720
MKFRPAVFLI ATFAVCLGVC AILLHPNQVN KFAVSIRRCL TDRL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1188200RRKLERHNNRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18830.10.0SBP family protein