PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021635423.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 233aa    MW: 26012.7 Da    PI: 6.8976
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021635423.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260121.25.6e-38111121101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     aCaaC+++rrkCa+dC+lapyfp++++++f n+hklFG++n+lk+l++l   +e+++a++s++y+A+arardPv+G++g+i++l+ q+e  + el
  XP_021635423.1  11 ACAACRYQRRKCAPDCPLAPYFPSNHSSDFINAHKLFGVRNILKTLRKLrTFNEKKNAVTSMIYQANARARDPVSGCCGIISRLNAQIEMYQLEL 105
                     7************************************************445669**************************************** PP

          DUF260  95 allkeel 101
                     +l++++l
  XP_021635423.1 106 SLVNQQL 112
                     ***9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MNPDTDTGSQ ACAACRYQRR KCAPDCPLAP YFPSNHSSDF INAHKLFGVR NILKTLRKLR  60
TFNEKKNAVT SMIYQANARA RDPVSGCCGI ISRLNAQIEM YQLELSLVNQ QLESHQQLTS  120
HHLQDFSQLN IDDDKQLQQL EDLSIVGNYQ PPHNYNSFDG IYDATQLHPI GFDQQQQQQQ  180
EEPNIVHGNY LPPHNYNSFG GPSVRIETKE SSSGHGGQPS SSGHGGQPSS STK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.14e-36LBD family protein