PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021635423.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 233aa MW: 26012.7 Da PI: 6.8976 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 121.2 | 5.6e-38 | 11 | 112 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 aCaaC+++rrkCa+dC+lapyfp++++++f n+hklFG++n+lk+l++l +e+++a++s++y+A+arardPv+G++g+i++l+ q+e + el XP_021635423.1 11 ACAACRYQRRKCAPDCPLAPYFPSNHSSDFINAHKLFGVRNILKTLRKLrTFNEKKNAVTSMIYQANARARDPVSGCCGIISRLNAQIEMYQLEL 105 7************************************************445669**************************************** PP DUF260 95 allkeel 101 +l++++l XP_021635423.1 106 SLVNQQL 112 ***9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MNPDTDTGSQ ACAACRYQRR KCAPDCPLAP YFPSNHSSDF INAHKLFGVR NILKTLRKLR 60 TFNEKKNAVT SMIYQANARA RDPVSGCCGI ISRLNAQIEM YQLELSLVNQ QLESHQQLTS 120 HHLQDFSQLN IDDDKQLQQL EDLSIVGNYQ PPHNYNSFDG IYDATQLHPI GFDQQQQQQQ 180 EEPNIVHGNY LPPHNYNSFG GPSVRIETKE SSSGHGGQPS SSGHGGQPSS STK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13850.1 | 4e-36 | LBD family protein |