PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW35131.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 277aa MW: 30202.1 Da PI: 7.5

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW35131.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	64.2	3.1e-20	88	142	1	55
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeere 55 +CaaCk+lrr+Ca +Cvlapyfp ++p kf +h++FGasn++kll+ ++++ + RWW35131.1 88 PCAACKILRRRCAGKCVLAPYFPPTEPLKFTTAHRVFGASNIIKLLQVSNPHRPQ 142 7**********************************************98887654 PP
2	DUF260	58.7	1.6e-18	159	213	46	100
DUF260 46 lkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 l++lpe++r da+ss+vyeA+ar+rdPvyG++g i++lq+q+++l+a+la++++e RWW35131.1 159 LQDLPESQRADAVSSMVYEANARIRDPVYGCAGAIFQLQKQVNELQAQLAQAQAE 213 899***********************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MASCSSTLAL YMYSPGLEAS HPHLDSFPPP SAKAMKSSDT TTTITASFRH SSSSSSSSNP 60 SSPTSSPISS SPPSLPPTTP PPPVIHSPCA ACKILRRRCA GKCVLAPYFP PTEPLKFTTA 120 HRVFGASNII KLLQVSNPHR PQDHRVIPPQ YNVNDRMRLQ DLPESQRADA VSSMVYEANA 180 RIRDPVYGCA GAIFQLQKQV NELQAQLAQA QAELLNLQAQ HKNLIALICV EVAQTQQDRA 240 PRSTDALAAG NYLLQNDAYF LDEINQEGSV WDEPLWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	1e-51	LBD family protein