PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW34986.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | GATA | ||||||||
Protein Properties | Length: 235aa MW: 25628.2 Da PI: 10.405 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.8 | 6.1e-18 | 164 | 198 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++C + kTp+WR gp g+ktLCnaCG+++++ +l RWW34986.1 164 CTHCLSQKTPQWRAGPLGPKTLCNACGVRFKSGRL 198 *******************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MDTSKNSSAA ATSLLGDYTP GEGGEDGSLE WLSIYVEDCL SSATSYTTFD PLPASAPLQT 60 PKIPKPTLES LAVQATARTK RRRRRRRRRR ITPRSLSINT CSTFHLTSSD PPLLHQAHWL 120 AESELILPKK QEEDKTPTPA LGGGGGGGGG EEKVGKEGVQ PRRCTHCLSQ KTPQWRAGPL 180 GPKTLCNACG VRFKSGRLLP EYRPAKSPTF VSYKHSNSHK KVMMMRMALL SSNPS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 78 | 87 | RTKRRRRRRR |
2 | 80 | 85 | KRRRRR |
3 | 80 | 86 | KRRRRRR |
4 | 80 | 88 | KRRRRRRRR |
5 | 80 | 91 | KRRRRRRRRRRI |
6 | 81 | 87 | KRRRRRR |
7 | 81 | 89 | KRRRRRRRR |
8 | 81 | 86 | RRRRRR |
9 | 81 | 88 | RRRRRRRR |
10 | 81 | 89 | RRRRRRRRR |
11 | 81 | 90 | RTKRRRRRRR |
12 | 82 | 88 | KRRRRRR |
13 | 82 | 90 | KRRRRRRRR |
14 | 82 | 87 | RRRRRR |
15 | 82 | 89 | RRRRRRRR |
16 | 82 | 90 | RRRRRRRRR |
17 | 82 | 91 | RTKRRRRRRR |
18 | 83 | 89 | KRRRRRR |
19 | 83 | 88 | RRRRRR |
20 | 83 | 90 | RRRRRRRR |
21 | 83 | 91 | RRRRRRRRR |
22 | 84 | 90 | KRRRRRR |
23 | 84 | 89 | RRRRRR |
24 | 84 | 91 | RRRRRRRR |
25 | 84 | 92 | RRRRRRRRR |
26 | 85 | 90 | RRRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45050.1 | 1e-35 | GATA family protein |