PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34944.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 488aa MW: 54822.6 Da PI: 5.4785

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34944.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.2	5.1e-12	246	288	8	55
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +Er+RR+++N+++ Lr l+Pk +K++ a+iL A+eY+ +Lq RWW34944.1 246 AERKRRKKLNDRLYALRALVPKI-----TKMDRASILGDAIEYVMDLQ 288 7*******************7.....7**************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
VRARTNVLVP MPAGLVELFV SEHVKCFLTS SSINMLRAQH TIRMTDFCSF FKQHSYITDG 60 QHTREFMMSQ CTSNSYDRSI DMPMADNNLD SSAAGGGGGD DSQPWLAQQS LATGAQALPW 120 DLYASHLNLF DRTKDDDVLH DGSTRNFFLL GNPPPPLSES MVGNGFPEDA LAYQQSLLTT 180 ANNLHYHNFG AESSVTREIA GHGKESLKME GNNARIESGS EGSDDDEEHR PARRSGKQHC 240 SKNLFAERKR RKKLNDRLYA LRALVPKITK MDRASILGDA IEYVMDLQKQ VKDLQDELEE 300 TNQEDDGHER QIGSNIHNSN SQMDVPIPNG WLDHDDSGNN PRTVAAADDN KPSSDKGQQM 360 EPQVEVRQLE ANEFFLKVLC EHKQGGFSRL MEAMSSLGLE VTNVSVTTYG SLVLNVFRVE 420 TIHMQRRDDE VVEADQVRDS LLEVTRDPQG WSGLAQAVEY QQHHHQHGHS DDHQLGFDHH 480 LHYLHHQA

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

VRARTNVLVP MPAGLVELFV SEHVKCFLTS SSINMLRAQH TIRMTDFCSF FKQHSYITDG  60
QHTREFMMSQ CTSNSYDRSI DMPMADNNLD SSAAGGGGGD DSQPWLAQQS LATGAQALPW  120
DLYASHLNLF DRTKDDDVLH DGSTRNFFLL GNPPPPLSES MVGNGFPEDA LAYQQSLLTT  180
ANNLHYHNFG AESSVTREIA GHGKESLKME GNNARIESGS EGSDDDEEHR PARRSGKQHC  240
SKNLFAERKR RKKLNDRLYA LRALVPKITK MDRASILGDA IEYVMDLQKQ VKDLQDELEE  300
TNQEDDGHER QIGSNIHNSN SQMDVPIPNG WLDHDDSGNN PRTVAAADDN KPSSDKGQQM  360
EPQVEVRQLE ANEFFLKVLC EHKQGGFSRL MEAMSSLGLE VTNVSVTTYG SLVLNVFRVE  420
TIHMQRRDDE VVEADQVRDS LLEVTRDPQG WSGLAQAVEY QQHHHQHGHS DDHQLGFDHH  480
LHYLHHQA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	247	254	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	5e-65	bHLH family protein