PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW34628.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NF-YC | ||||||||
Protein Properties | Length: 218aa MW: 24082.3 Da PI: 5.2477 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 178.5 | 6.1e-56 | 24 | 128 | 1 | 102 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie+atdfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa++rtdifdflvdiv RWW34628.1 24 QLQMFWNYQrqeIEHATDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAISRTDIFDFLVDIV 122 89*****998899************************************************************************************** PP NF-YC 97 prdelk 102 pr+e+k RWW34628.1 123 PREEIK 128 **9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MDNQPPHSYP QAPFHHLLQQ QHQQLQMFWN YQRQEIEHAT DFKNHQLPLA RIKKIMKADE 60 DVRMISAEAP ILFAKACELF ILELTIRSWL HAEENKRRTL QKNDIAAAIS RTDIFDFLVD 120 IVPREEIKEE ALGLVGGSGE GGATAGVPYY YPPVGQPGPG VIMGQPAVAG IDPAIYVQQQ 180 AWQPLWHQGL PEDGTGQGLD GSGYAAAPPP PPPAPPSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 97 | 103 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63470.2 | 8e-69 | NF-YC family protein |